• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

突破壁垒:核磁共振自旋弛豫中内部运动的连续势模型

Breaking down walls: Continuous potential models for internal motions in NMR spin relaxation.

作者信息

Palmer Arthur G

机构信息

Department of Biochemistry and Molecular Biophysics, Columbia University, 630 West 168th Street, New York, NY 10032, United States of America.

出版信息

J Magn Reson. 2024 Jun;363:107705. doi: 10.1016/j.jmr.2024.107705. Epub 2024 May 22.

DOI:10.1016/j.jmr.2024.107705
PMID:38815460
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11528698/
Abstract

Simple physical models for restricted diffusion in a potential, which provide important insights for NMR spin relaxation, usually are based on free diffusion within rigid boundaries or diffusion in relatively simple continuous potential energy surfaces. The diffusion-in-a-cone model is an example of the former and diffusion in an N-fold cosine potential is an example of the latter. The present work models restricted diffusion for arbitrary potential energy functions on the surface of a cone or a sphere, by expanding the potentials in Fourier or spherical harmonic series, respectively. The results exhibit simple relationships between generalized order parameters and effective correlation times, critical for analysis of experimental spin relaxation data, and illustrate the transition from diffusive-like to jump-like behavior in multi-well potentials.

摘要

用于描述在势场中受限扩散的简单物理模型,为核磁共振自旋弛豫提供了重要见解,通常基于刚性边界内的自由扩散或相对简单的连续势能面中的扩散。锥形扩散模型是前者的一个例子,而在N重余弦势中的扩散是后者的一个例子。本工作通过分别在傅里叶级数或球谐级数中展开势能,对锥形或球形表面上任意势能函数的受限扩散进行建模。结果展示了广义序参量与有效相关时间之间的简单关系,这对于分析实验自旋弛豫数据至关重要,并说明了在多阱势中从扩散样行为到跳跃样行为的转变。

相似文献

1
Breaking down walls: Continuous potential models for internal motions in NMR spin relaxation.突破壁垒:核磁共振自旋弛豫中内部运动的连续势模型
J Magn Reson. 2024 Jun;363:107705. doi: 10.1016/j.jmr.2024.107705. Epub 2024 May 22.
2
A test of the model-free formulas. Effects of anisotropic rotational diffusion and dimerization.无模型公式的测试。各向异性旋转扩散和二聚化的影响。
J Magn Reson B. 1994 Nov;105(3):211-24. doi: 10.1006/jmrb.1994.1127.
3
Analysis of the backbone dynamics of interleukin-1 beta using two-dimensional inverse detected heteronuclear 15N-1H NMR spectroscopy.使用二维反向检测异核15N-1H NMR光谱分析白细胞介素-1β的主链动力学。
Biochemistry. 1990 Aug 14;29(32):7387-401. doi: 10.1021/bi00484a006.
4
Backbone dynamics of barstar: a (15)N NMR relaxation study.巴司他丁的主链动力学:一项(15)N核磁共振弛豫研究。
Proteins. 2000 Dec 1;41(4):460-74. doi: 10.1002/1097-0134(20001201)41:4<460::aid-prot40>3.0.co;2-x.
5
The nuclear magnetic resonance relaxation data analysis in solids: general R1/R1(ρ) equations and the model-free approach.固体核磁共振弛豫数据分析:一般的 R1/R1(ρ)方程和无模型方法。
J Chem Phys. 2011 Nov 14;135(18):184104. doi: 10.1063/1.3658383.
6
Local isotropic diffusion approximation for coupled internal and overall molecular motions in NMR spin relaxation.核磁共振自旋弛豫中耦合内部和整体分子运动的局部各向同性扩散近似
J Phys Chem B. 2014 Sep 25;118(38):11120-8. doi: 10.1021/jp506580c. Epub 2014 Sep 11.
7
NMR spin-rotation relaxation and diffusion of methane.NMR 自旋-旋转弛豫和甲烷的扩散。
J Chem Phys. 2018 May 28;148(20):204504. doi: 10.1063/1.5027097.
8
Effect of Coupling between Rotational and Translational Brownian Motions on NMR Spin Relaxation: Consideration Using Green Function of Rigid Body Diffusion.旋转和平动布朗运动之间的耦合对核磁共振自旋弛豫的影响:基于刚体扩散格林函数的考量
J Magn Reson. 1998 Jun;132(2):328-9. doi: 10.1006/jmre.1998.1395.
9
A structural mode-coupling approach to 15N NMR relaxation in proteins.一种用于蛋白质中15N NMR弛豫的结构模式耦合方法。
J Am Chem Soc. 2001 Apr 4;123(13):3055-63. doi: 10.1021/ja003803v.
10
Smoluchowski dynamics of the vnd/NK-2 homeodomain from Drosophila melanogaster: first-order mode-coupling approximation.果蝇黑腹果蝇vnd/NK-2同源结构域的斯莫卢霍夫斯基动力学:一阶模式耦合近似
Biopolymers. 1999 Mar;49(3):235-54. doi: 10.1002/(SICI)1097-0282(199903)49:3<235::AID-BIP5>3.0.CO;2-7.

本文引用的文献

1
Deuterium spin relaxation of fractionally deuterated ribonuclease H using paired 475 and 950 MHz NMR spectrometers.使用配对的 475 和 950 MHz NMR 光谱仪研究部分氘代核糖核酸酶 H 的氘核自旋弛豫。
J Biomol NMR. 2024 Sep;78(3):169-177. doi: 10.1007/s10858-024-00443-w. Epub 2024 Jun 10.
2
Unraveling motion in proteins by combining NMR relaxometry and molecular dynamics simulations: A case study on ubiquitin.通过将 NMR 弛豫测量法和分子动力学模拟相结合来揭示蛋白质中的运动:以泛素为例的研究。
J Chem Phys. 2024 Mar 14;160(10). doi: 10.1063/5.0188416.
3
Dynamical Models of Chemical Exchange in Nuclear Magnetic Resonance Spectroscopy.
核磁共振光谱中化学交换的动力学模型
Biophysicist (Rockv). 2022 Jul;3(1):13-34. doi: 10.35459/tbp.2021.000201. Epub 2021 Dec 7.
4
Explicit Models of Motion to Understand Protein Side-Chain Dynamics.理解蛋白质侧链动力学的显式运动模型。
Phys Rev Lett. 2022 Nov 11;129(20):203001. doi: 10.1103/PhysRevLett.129.203001.
5
Measuring Entropy in Molecular Recognition by Proteins.蛋白质分子识别中的熵测量。
Annu Rev Biophys. 2018 May 20;47:41-61. doi: 10.1146/annurev-biophys-060414-034042. Epub 2018 Jan 18.
6
Dynamics of GCN4 facilitate DNA interaction: a model-free analysis of an intrinsically disordered region.GCN4的动力学促进DNA相互作用:对一个内在无序区域的无模型分析
Phys Chem Chem Phys. 2016 Feb 17;18(8):5839-49. doi: 10.1039/c5cp06197k.
7
A realistic potential model for N-H vector diffusion in proteins.一种用于蛋白质中N-H向量扩散的现实势能模型。
J Chem Phys. 2006 Feb 21;124(7):74902. doi: 10.1063/1.2166376.
8
Insights into the local residual entropy of proteins provided by NMR relaxation.核磁共振弛豫对蛋白质局部残余熵的洞察。
Protein Sci. 1996 Dec;5(12):2647-50. doi: 10.1002/pro.5560051228.
9
Contributions to conformational entropy arising from bond vector fluctuations measured from NMR-derived order parameters: application to protein folding.通过核磁共振衍生的序参量测量的键向量涨落对构象熵的贡献:在蛋白质折叠中的应用
J Mol Biol. 1996 Oct 25;263(2):369-82. doi: 10.1006/jmbi.1996.0581.
10
Effect of librational motion on fluorescence depolarization and nuclear magnetic resonance relaxation in macromolecules and membranes.大分子和膜中振动运动对荧光去极化和核磁共振弛豫的影响。
Biophys J. 1980 Jun;30(3):489-506. doi: 10.1016/S0006-3495(80)85109-5.