Paix Benoit, van der Valk Elodie, de Voogd Nicole J
Naturalis Biodiversity Center, Leiden, The Netherlands.
UMR CARRTEL, INRAE - Université Savoie Mont-Blanc, Thonon-les-Bains, France.
Environ Microbiome. 2024 Jun 8;19(1):37. doi: 10.1186/s40793-024-00580-7.
Sponge-associated bacteria play important roles in the physiology of their host, whose recruitment processes are crucial to maintain symbiotic associations. However, the acquisition of bacterial communities within freshwater sponges is still under explored. Spongilla lacustris is a model sponge widely distributed in European rivers and lakes, producing dormant cysts (named gemmules) for their asexual reproduction, before winter. Through an in vitro experiment, this study aims to describe the dynamics of bacterial communities and their transmission modes following the hatching of these gemmules.
An overall change of bacterial β-diversity was observed through the ontology of the juvenile sponges. These temporal differences were potentially linked, first to the osculum acquisition and the development of a canal system, and then, the increasing colonization of the Chlorella-like photosymbionts. Gemmules hatching with a sterilized surface were found to have a more dispersed and less diverse microbiome, revealing the importance of gemmule epibacteria for the whole holobiont stability. These epibacteria were suggested to be vertically transmitted from the maternal tissues to the gemmule surface. Vertical transmission through the incorporation of bacterial communities inside of the gemmule, was also found as a dominant transmission mode, especially with the nitrogen fixers Terasakiellaceae. Finally, we showed that almost no ASVs were shared between the free-living community and the juveniles, suggesting that horizontal recruitment is unlikely to happen during the first stages of development. However, the free-living bacteria filtered are probably used as a source of nutrients, allowing an enrichment of copiotrophic bacteria already present within its microbiome.
This study brings new insight for a better understanding of the microbiome acquisition during the first stages of freshwater sponge development. We showed the importance of epibacterial communities on gemmules for the whole holobiont stability, and demonstrated the near absence of recruitment of free-living bacteria during the first stages.
海绵相关细菌在其宿主的生理过程中发挥着重要作用,细菌的招募过程对于维持共生关系至关重要。然而,淡水海绵内细菌群落的获取仍有待探索。湖海绵是一种广泛分布于欧洲河流和湖泊中的模式海绵,在冬季来临之前会产生用于无性繁殖的休眠囊(称为芽球)。通过一项体外实验,本研究旨在描述这些芽球孵化后细菌群落的动态变化及其传播方式。
通过幼体海绵的个体发育过程观察到细菌β多样性的总体变化。这些时间上的差异可能首先与出水口的形成和管道系统的发育有关,然后与类小球藻光合共生体的定殖增加有关。发现表面经过灭菌处理的芽球孵化后具有更分散且多样性更低的微生物组,这揭示了芽球表生细菌对整个共生体稳定性的重要性。这些表生细菌被认为是从母体组织垂直传播到芽球表面的。通过将细菌群落纳入芽球内部进行垂直传播也被发现是一种主要的传播方式,尤其是对于固氮菌Terasakiellaceae。最后,我们表明自由生活群落和幼体之间几乎没有共享的扩增子序列变体(ASVs),这表明在发育的最初阶段不太可能发生水平招募。然而,过滤的自由生活细菌可能被用作营养源,使已经存在于其微生物组中的富营养细菌得以富集。
本研究为更好地理解淡水海绵发育第一阶段微生物组的获取提供了新的见解。我们展示了芽球上的表生细菌群落对整个共生体稳定性的重要性,并证明了在最初阶段几乎没有自由生活细菌的招募。