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利用高通量测序技术鉴定中国广汉三星堆遗址埋藏象牙土壤中的微生物多样性。

Identification of microbial diversity in buried ivory soil at the Sanxingdui site in Guanghan City, China, using high-throughput sequencing.

作者信息

Sun Siyu, Xu Zhe, Ren Mengjia, Li Sifan, Xie Zhenbin, Luo Yanbing, Tian Yongqiang

机构信息

College of Biomass Science and Engineering, Sichuan University, Chengdu, China.

School of History and Culture, National Center for Experimental Archaeology Education, Sichuan University, Chengdu, China.

出版信息

Front Microbiol. 2024 May 30;15:1384650. doi: 10.3389/fmicb.2024.1384650. eCollection 2024.

DOI:10.3389/fmicb.2024.1384650
PMID:38873157
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11169624/
Abstract

INTRODUCTION

The Sanxingdui Site in Guanghan City, Sichuan Province, China, is one of the precious heritage sites of the ancient Chinese civilization. Archaeological work at Sanxingdui is of great significance in clarifying the origins and main contents of the ancient Shu culture and the Yangtze River civilization. Since the 1920s, archaeologists have conducted extensive excavations and research at the site, with particular attention given to the large number of ivory artifacts unearthed. However, the buried ivory is influenced by soil pH, temperature, humidity, and other physical and chemical factors, along with the potential impact of microbial activities that may lead to the corrosion and decomposition of ivory. By understanding the types and activities of microorganisms, appropriate measures can be taken to protect and preserve cultural relics.

METHODS

Multi-point sampling of soil samples around the ivory of the three sacrificial pits at the Sanxingdui site was carried out, and strict aseptic operation was carried out during the sampling process. Subsequently, the microbial community structure and diversity in the buried ivory soil of Sanxingdui site were identified and analyzed by Illumina high-throughput sequencing technology.

RESULTS

16S rRNA and internal transcribed spacer sequence analysis revealed significant differences in the soil microbial community structure among different sacrificial pits. The dominant bacterial phyla were the Proteobacteria, GAL15, Actinobacteriota, Bacteroidota, and Methylomirabilota. The dominant fungal phyla were Ascomycota, Mortierellomhcota, and Basidiomycota. Most dominant bacterial and fungal communities play an indispensable role in the ivory corrosion mechanism, promoting the decay and decomposition process through various means such as decomposing organic matter and producing acidic substances.

DISCUSSION

It is particularly important to take a series of measures to control microbial activity to effectively protect ivory. Our preliminary study of the mechanism of action of microorganisms on ivory in a buried environment provides a scientific basis to prevent and protect against microbial degradation in ancient ivory unearthed in Sanxingdui. Following the research results, suitable antibacterial agents tailored to the preservation environment and microbial characteristics of ancient ivory can be prepared. Ensure that the selected antibacterial agents meet safety and effectiveness requirements to maximize protection against microbial degradation of ancient ivory.

摘要

引言

中国四川省广汉市的三星堆遗址是中国古代文明珍贵的遗产地之一。三星堆的考古工作对于阐明古蜀文化和长江文明的起源及主要内容具有重要意义。自20世纪20年代以来,考古学家在该遗址进行了广泛的发掘和研究,特别关注出土的大量象牙制品。然而,埋藏的象牙受到土壤酸碱度、温度、湿度等物理化学因素的影响,以及微生物活动的潜在影响,这可能导致象牙的腐蚀和分解。通过了解微生物的种类和活动,可以采取适当措施保护文物。

方法

对三星堆遗址三个祭祀坑象牙周围的土壤样本进行多点采样,采样过程中严格进行无菌操作。随后,采用Illumina高通量测序技术对三星堆遗址埋藏象牙土壤中的微生物群落结构和多样性进行鉴定和分析。

结果

16S rRNA和内转录间隔区序列分析表明,不同祭祀坑的土壤微生物群落结构存在显著差异。优势细菌门为变形菌门、GAL15、放线菌门、拟杆菌门和甲烷微菌门。优势真菌门为子囊菌门、被孢霉门和担子菌门。大多数优势细菌和真菌群落对角腐蚀机制起着不可或缺的作用,通过分解有机物和产生酸性物质等各种方式促进腐朽和分解过程。

讨论

采取一系列措施控制微生物活动对于有效保护象牙尤为重要。我们对埋藏环境中微生物对象牙作用机制的初步研究为防止和保护三星堆出土古象牙的微生物降解提供了科学依据。根据研究结果,可以制备适合古象牙保存环境和微生物特性的合适抗菌剂。确保所选抗菌剂符合安全性和有效性要求,以最大程度地保护古象牙免受微生物降解。

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