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在白质营养不良数据分析中,两种个人健康训练基础设施的互操作性研究。

A study on interoperability between two Personal Health Train infrastructures in leukodystrophy data analysis.

机构信息

RWTH Aachen University, Chair of Computer Science 5, Aachen, 52074, Germany.

University Hospital Tübingen, Institute for Translational Bioinformatics, Tübingen, 72072, Germany.

出版信息

Sci Data. 2024 Jun 22;11(1):663. doi: 10.1038/s41597-024-03450-6.

DOI:10.1038/s41597-024-03450-6
PMID:38909050
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11193731/
Abstract

The development of platforms for distributed analytics has been driven by a growing need to comply with various governance-related or legal constraints. Among these platforms, the so-called Personal Health Train (PHT) is one representative that has emerged over the recent years. However, in projects that require data from sites featuring different PHT infrastructures, institutions are facing challenges emerging from the combination of multiple PHT ecosystems, including data governance, regulatory compliance, or the modification of existing workflows. In these scenarios, the interoperability of the platforms is preferable. In this work, we introduce a conceptual framework for the technical interoperability of the PHT covering five essential requirements: Data integration, unified station identifiers, mutual metadata, aligned security protocols, and business logic. We evaluated our concept in a feasibility study that involves two distinct PHT infrastructures: PHT-meDIC and PADME. We analyzed data on leukodystrophy from patients in the University Hospitals of Tübingen and Leipzig, and patients with differential diagnoses at the University Hospital Aachen. The results of our study demonstrate the technical interoperability between these two PHT infrastructures, allowing researchers to perform analyses across the participating institutions. Our method is more space-efficient compared to the multi-homing strategy, and it shows only a minimal time overhead.

摘要

为了满足各种与治理相关的或法律上的约束,分布式分析平台的开发一直受到推动。在这些平台中,所谓的个人健康训练(PHT)是近年来出现的一个有代表性的平台。然而,在需要来自具有不同 PHT 基础设施的站点的数据的项目中,机构面临着来自多个 PHT 生态系统的组合所带来的挑战,包括数据治理、法规遵从性,或对现有工作流程的修改。在这些情况下,平台的互操作性是可取的。在这项工作中,我们引入了一个涵盖五个基本要求的 PHT 技术互操作性的概念框架:数据集成、统一站点标识符、相互元数据、对齐的安全协议和业务逻辑。我们在涉及两个不同的 PHT 基础设施的可行性研究中评估了我们的概念:PHT-meDIC 和 PADME。我们分析了来自图宾根和莱比锡大学医院的白细胞营养不良症患者以及亚琛大学医院的不同诊断患者的数据。我们的研究结果证明了这两个 PHT 基础设施之间的技术互操作性,允许研究人员在参与的机构中进行分析。与多宿主策略相比,我们的方法更节省空间,并且只显示出最小的时间开销。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/e763f27ac4de/41597_2024_3450_Fig11_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/b1c15bcf9508/41597_2024_3450_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/3ce4b74e972b/41597_2024_3450_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/9f6977e2ecb1/41597_2024_3450_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/fe64f3d1ff12/41597_2024_3450_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/7a01b8a17321/41597_2024_3450_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/01886b672bc2/41597_2024_3450_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/7ce99f02eaf4/41597_2024_3450_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/3703c37eb9da/41597_2024_3450_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/d3628955f9ed/41597_2024_3450_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/f81e203f54bf/41597_2024_3450_Fig10_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1ec/11193731/e763f27ac4de/41597_2024_3450_Fig11_HTML.jpg

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