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[色谱法在糖组学中的应用]

[Applications of chromatography in glycomics].

作者信息

Zheng Yi, Cao Cui-Yan, Guo Zhi-Mou, Yan Jing-Yu, Liang Xin-Miao

机构信息

Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China.

Ganjiang Chinese Medicine Innovation Center, Nanchang 330100, China.

出版信息

Se Pu. 2024 Jul;42(7):646-657. doi: 10.3724/SP.J.1123.2023.12003.

DOI:10.3724/SP.J.1123.2023.12003
PMID:38966973
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11224943/
Abstract

Glycomics, an emerging "omics" technology that was developed after genomics and proteomics, is a discipline that studies the composition, structure, and functions of glycomes in cells, tissues, and organisms. Glycomics plays key roles in understanding the laws of major life activities, disease prevention and treatment, and drug quality control and development. At present, the structural analysis of glycans relies mainly on mass spectrometry. However, glycans have low abundance in biological samples. In addition, factors such as variable monosaccharide compositions, differences in glycosidic bond positions and modes, diverse branching structures, contribute to the complexity of the compositions and structures of glycans, posing great challenges to glycomics research. Liquid chromatography can effectively remove matrix interferences and enhance glycan separation to improve the mass spectrometric response of glycans. Thus, liquid chromatography and liquid chromatography coupled with mass spectrometry are important technical tools that have been actively applied to solve these problems; these technologies play indispensable roles in glycomics research. Different studies have highlighted similarities and differences in the applications of various types of liquid chromatography, which also reflects the versatility and flexibility of this technology. In this review, we first discuss the enrichment methods for glycans and their applications in glycomics research from the perspective of chromatographic separation mechanisms. We then compare the advantages and disadvantages of these methods. Some glycan-enrichment modes include affinity, hydrophilic interactions, size exclusion, and porous graphitized carbon adsorption. A number of newly developed materials exhibit excellent glycan-enrichment ability. We enumerate the separation mechanisms of reversed-phase high performance liquid chromatography (RP-HPLC), high performance anion-exchange chromatography (HPAEC), hydrophilic interaction chromatography (HILIC), and porous graphitic carbon (PGC) chromatography in the separation and analysis of glycans, and describe the applications of these methods in the separation of glycans, glycoconjugates, and glyco-derivatives. Among these methods, HILIC and PGC chromatography are the most widely used, whereas HPAEC and RP-HPLC are less commonly used. The HILIC and RP-HPLC modes are often used for the separation of derived glycans. The ionization efficiency and detectability of glycans are significantly improved after derivatization. However, the derivatization process is relatively cumbersome, and byproducts inevitably affect the accuracy and completeness of the detection results. HPAEC and PGC chromatography exhibit good separation effects on nonderivative glycans, but issues related to the detection integrity of low-abundance glycans owing to their poor detection effect continue to persist. Therefore, the appropriate analytical method for a specific sample or target analyte or mutual verification must be selected. Finally, we highlight the research progress in various chromatographic methods coupled with mass spectrometry for glycomics analysis. Significant progress has been made in glycomics research in recent years owing to advancements in the development of chromatographic separation techniques. However, several significant challenges remain. As the development of novel separation materials and methods continues, chromatographic techniques may be expected to play a critical role in future glycomics research.

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/b7bbd4249ee8/cjc-42-07-646-img_4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/a5d6f25e2347/cjc-42-07-646-img_1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/7ef46e05669a/cjc-42-07-646-img_2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/66af6c43d61a/cjc-42-07-646-img_3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/b7bbd4249ee8/cjc-42-07-646-img_4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/a5d6f25e2347/cjc-42-07-646-img_1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/7ef46e05669a/cjc-42-07-646-img_2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/66af6c43d61a/cjc-42-07-646-img_3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9e6/11224943/b7bbd4249ee8/cjc-42-07-646-img_4.jpg
摘要

糖组学是继基因组学和蛋白质组学之后发展起来的一种新兴的“组学”技术,是研究细胞、组织和生物体中糖组的组成、结构和功能的学科。糖组学在理解主要生命活动规律、疾病防治以及药物质量控制与研发等方面发挥着关键作用。目前,聚糖的结构分析主要依赖于质谱。然而,聚糖在生物样品中的丰度较低。此外,诸如单糖组成可变、糖苷键位置和方式不同、分支结构多样等因素,导致聚糖的组成和结构复杂,给糖组学研究带来了巨大挑战。液相色谱可以有效去除基质干扰,增强聚糖分离,以提高聚糖的质谱响应。因此,液相色谱以及液相色谱 - 质谱联用是积极应用于解决这些问题的重要技术工具;这些技术在糖组学研究中发挥着不可或缺的作用。不同的研究突出了各类液相色谱应用中的异同,这也反映了该技术的多功能性和灵活性。在本综述中,我们首先从色谱分离机制的角度讨论聚糖的富集方法及其在糖组学研究中的应用。然后我们比较这些方法的优缺点。一些聚糖富集模式包括亲和、亲水相互作用、尺寸排阻和多孔石墨化碳吸附。许多新开发的材料表现出优异的聚糖富集能力。我们列举了反相高效液相色谱(RP - HPLC)、高效阴离子交换色谱(HPAEC)、亲水相互作用色谱(HILIC)和多孔石墨化碳(PGC)色谱在聚糖分离分析中的分离机制,并描述了这些方法在聚糖、糖缀合物和糖衍生物分离中的应用。在这些方法中,HILIC和PGC色谱应用最为广泛,而HPAEC和RP - HPLC使用较少。HILIC和RP - HPLC模式常用于衍生化聚糖的分离。衍生化后聚糖的电离效率和可检测性显著提高。然而,衍生化过程相对繁琐,副产物不可避免地会影响检测结果的准确性和完整性。HPAEC和PGC色谱对非衍生化聚糖表现出良好的分离效果,但由于其检测效果不佳,低丰度聚糖的检测完整性相关问题仍然存在。因此,必须针对特定样品或目标分析物选择合适的分析方法或进行相互验证。最后,我们强调了各种色谱方法与质谱联用在糖组学分析方面的研究进展。近年来,由于色谱分离技术的发展进步,糖组学研究取得了显著进展。然而,仍存在一些重大挑战。随着新型分离材料和方法的不断发展,色谱技术有望在未来的糖组学研究中发挥关键作用。

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