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鲟鱼研究中的代谢组学:小型综述。

Metabolomics in sturgeon research: a mini-review.

机构信息

Graduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, 739-8528, Japan.

出版信息

Fish Physiol Biochem. 2024 Aug;50(4):1895-1910. doi: 10.1007/s10695-024-01377-8. Epub 2024 Jul 9.

DOI:10.1007/s10695-024-01377-8
PMID:38980504
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11286732/
Abstract

Sturgeons are ancient fish, with 27 species distributed in the Northern Hemisphere. This review first touches upon the significance of sturgeons in the context of their biological, ecological, and economic importance, highlighting their status as "living fossils" and the challenges they face in genomic research due to their diverse chromosome numbers. This review then discusses how omics technologies (genomics, transcriptomics, proteomics, and metabolomics) have been used in sturgeon research, which so far has only been done on Acipenser species. It focuses on metabolomics as a way to better understand how sturgeons work and how they react to their environment. Specific studies in sturgeon metabolomics are cited, showing how metabolomics has been used to investigate various aspects of sturgeon biology, such as growth, reproduction, stress responses, and nutrition. These studies demonstrate the potential of metabolomics in improving sturgeon aquaculture practices and conservation efforts. Overall, the review suggests that metabolomics, as a relatively new scientific tool, has the potential to enhance our understanding of sturgeon biology and aid in their conservation and sustainable aquaculture, contributing to global food security efforts.

摘要

鲟鱼是一种古老的鱼类,有 27 个种分布在北半球。本综述首先探讨了鲟鱼在生物、生态和经济重要性方面的意义,强调了它们作为“活化石”的地位,以及由于其染色体数量多样,在基因组研究中面临的挑战。本综述还讨论了组学技术(基因组学、转录组学、蛋白质组学和代谢组学)在鲟鱼研究中的应用,目前这些技术仅在鲟科物种中进行过研究。本综述重点讨论了代谢组学作为一种更好地了解鲟鱼工作原理以及它们对环境反应的方法。引用了鲟鱼代谢组学的具体研究,展示了代谢组学如何用于研究鲟鱼生物学的各个方面,如生长、繁殖、应激反应和营养。这些研究表明代谢组学在改善鲟鱼水产养殖实践和保护工作方面具有潜力。总的来说,本综述表明,代谢组学作为一种相对较新的科学工具,有可能增强我们对鲟鱼生物学的理解,并有助于它们的保护和可持续水产养殖,为全球粮食安全做出贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850f/11286732/7694dac5fc86/10695_2024_1377_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850f/11286732/7694dac5fc86/10695_2024_1377_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/850f/11286732/7694dac5fc86/10695_2024_1377_Fig1_HTML.jpg

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Genomics Proteomics Bioinformatics. 2024 May 9;22(1). doi: 10.1093/gpbjnl/qzad002.
2
Comparative proteomic analysis of the ovarian fluid and eggs of Siberian sturgeon.比较西伯利亚鲟的卵和卵巢液的蛋白质组学分析。
BMC Genomics. 2024 May 7;25(1):451. doi: 10.1186/s12864-024-10309-y.
3
Ancient vertebrate dermal armor evolved from trunk neural crest.古代脊椎动物的真皮盔甲由躯干神经嵴进化而来。
Proc Natl Acad Sci U S A. 2023 Jul 25;120(30):e2221120120. doi: 10.1073/pnas.2221120120. Epub 2023 Jul 17.
4
Physiological, Nutritional and Transcriptomic Responses of Sturgeon () to Complete Substitution of Fishmeal with Cottonseed Protein Concentrate in Aquafeed.鲟鱼对水产饲料中用棉籽浓缩蛋白完全替代鱼粉的生理、营养和转录组学反应
Biology (Basel). 2023 Mar 23;12(4):490. doi: 10.3390/biology12040490.
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Signal Transduct Target Ther. 2023 Mar 20;8(1):132. doi: 10.1038/s41392-023-01399-3.
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Integrated biochemical, transcriptomic and metabolomic analyses provide insight into heat stress response in Yangtze sturgeon (Acipenser dabryanus).综合生化、转录组学和代谢组学分析为长江鲟(达氏鲟)的热应激反应提供了深入见解。
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Whole-Genome Inter-Sex Variation in Russian Sturgeon ().俄罗斯鲟()全基因组性别间变异。
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