• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单细胞 RNA 测序揭示特发性肺纤维化中的特殊基底细胞和成纤维细胞。

Single-cell RNA sequencing reveals special basal cells and fibroblasts in idiopathic pulmonary fibrosis.

机构信息

Department of Respiratory Medicine, The Second Affiliated Hospital, Hainan Medical University, Haikou, 570100, China.

The Second Affiliated Clinical College, Hainan Medical University, Haikou, 570100, China.

出版信息

Sci Rep. 2024 Jul 9;14(1):15778. doi: 10.1038/s41598-024-66947-5.

DOI:10.1038/s41598-024-66947-5
PMID:38982264
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11233624/
Abstract

Idiopathic pulmonary fibrosis (IPF) is the most predominant type of idiopathic interstitial pneumonia and has an increasing incidence, poor prognosis, and unclear pathogenesis. In order to investigate the molecular mechanisms underlying IPF further, we performed single-cell RNA sequencing analysis on three healthy controls and five IPF lung tissue samples. The results revealed a significant shift in epithelial cells (ECs) phenotypes in IPF, which may be attributed to the differentiation of alveolar type 2 cells to basal cells. In addition, several previously unrecognized basal cell subtypes were preliminarily identified, including extracellular matrix basal cells, which were increased in the IPF group. We identified a special population of fibroblasts that highly expressed extracellular matrix-related genes, POSTN, CTHRC1, COL3A1, COL5A2, and COL12A1. We propose that the close interaction between ECs and fibroblasts through ligand-receptor pairs may have a critical function in IPF development. Collectively, these outcomes provide innovative perspectives on the complexity and diversity of basal cells and fibroblasts in IPF and contribute to the understanding of possible mechanisms in pathological lung fibrosis.

摘要

特发性肺纤维化(IPF)是最主要的特发性间质性肺炎类型,其发病率不断增加,预后不良,发病机制尚不清楚。为了进一步研究 IPF 的分子机制,我们对 3 名健康对照者和 5 名 IPF 肺组织样本进行了单细胞 RNA 测序分析。结果显示,IPF 中上皮细胞(ECs)表型发生了显著变化,这可能归因于肺泡 2 型细胞向基底细胞的分化。此外,初步鉴定出了几种以前未被识别的基底细胞亚型,包括细胞外基质基底细胞,其在 IPF 组中增加。我们鉴定了一种特殊的成纤维细胞群体,其高度表达细胞外基质相关基因 POSTN、CTHRC1、COL3A1、COL5A2 和 COL12A1。我们提出,ECs 和成纤维细胞通过配体-受体对的紧密相互作用可能在 IPF 发展中具有关键作用。总之,这些结果为 IPF 中基底细胞和成纤维细胞的复杂性和多样性提供了新的视角,并有助于理解病理性肺纤维化的可能机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/ee4dc006eb19/41598_2024_66947_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/7a9a541a11fe/41598_2024_66947_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/1a5ed44819a2/41598_2024_66947_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/7eddde7559a1/41598_2024_66947_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/9cc0660584ff/41598_2024_66947_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/9f95e3fe6b7b/41598_2024_66947_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/ee4dc006eb19/41598_2024_66947_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/7a9a541a11fe/41598_2024_66947_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/1a5ed44819a2/41598_2024_66947_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/7eddde7559a1/41598_2024_66947_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/9cc0660584ff/41598_2024_66947_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/9f95e3fe6b7b/41598_2024_66947_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9989/11233624/ee4dc006eb19/41598_2024_66947_Fig6_HTML.jpg

相似文献

1
Single-cell RNA sequencing reveals special basal cells and fibroblasts in idiopathic pulmonary fibrosis.单细胞 RNA 测序揭示特发性肺纤维化中的特殊基底细胞和成纤维细胞。
Sci Rep. 2024 Jul 9;14(1):15778. doi: 10.1038/s41598-024-66947-5.
2
Klotho antagonizes pulmonary fibrosis through suppressing pulmonary fibroblasts activation, migration, and extracellular matrix production: a therapeutic implication for idiopathic pulmonary fibrosis.Klotho 通过抑制肺成纤维细胞的激活、迁移和细胞外基质的产生来拮抗肺纤维化:对特发性肺纤维化的治疗意义。
Aging (Albany NY). 2020 Apr 3;12(7):5812-5831. doi: 10.18632/aging.102978.
3
SEMA3B inhibits TGFβ-induced extracellular matrix protein production and its reduced levels are associated with a decline in lung function in IPF.SEMA3B 抑制 TGFβ 诱导的细胞外基质蛋白产生,其水平降低与特发性肺纤维化中肺功能下降有关。
Am J Physiol Cell Physiol. 2024 Jun 1;326(6):C1659-C1668. doi: 10.1152/ajpcell.00681.2023. Epub 2024 Apr 22.
4
R-Spondin-2 Is Upregulated in Idiopathic Pulmonary Fibrosis and Affects Fibroblast Behavior.R-Spondin-2 在特发性肺纤维化中上调,并影响成纤维细胞行为。
Am J Respir Cell Mol Biol. 2018 Jul;59(1):65-76. doi: 10.1165/rcmb.2017-0115OC.
5
Cartilage oligomeric matrix protein in idiopathic pulmonary fibrosis.特发性肺纤维化中的软骨寡聚基质蛋白。
PLoS One. 2013 Dec 20;8(12):e83120. doi: 10.1371/journal.pone.0083120. eCollection 2013.
6
Pathogenesis of idiopathic pulmonary fibrosis.特发性肺纤维化的发病机制。
Annu Rev Pathol. 2014;9:157-79. doi: 10.1146/annurev-pathol-012513-104706. Epub 2013 Sep 13.
7
Transcriptomic profiling reveals disease-specific characteristics of epithelial cells in idiopathic pulmonary fibrosis.转录组谱分析揭示特发性肺纤维化中上皮细胞的疾病特异性特征。
Respir Res. 2020 Jun 30;21(1):165. doi: 10.1186/s12931-020-01414-z.
8
Proliferating SPP1/MERTK-expressing macrophages in idiopathic pulmonary fibrosis.特发性肺纤维化中增殖的 SPP1/MERTK 表达巨噬细胞。
Eur Respir J. 2019 Aug 22;54(2). doi: 10.1183/13993003.02441-2018. Print 2019 Aug.
9
Lung Fibroblasts, Aging, and Idiopathic Pulmonary Fibrosis.肺成纤维细胞、衰老与特发性肺纤维化
Ann Am Thorac Soc. 2016 Dec;13 Suppl 5:S417-S421. doi: 10.1513/AnnalsATS.201605-341AW.
10
Novel differences in gene expression and functional capabilities of myofibroblast populations in idiopathic pulmonary fibrosis.特发性肺纤维化中肌成纤维细胞群体的基因表达和功能特性的新差异。
Am J Physiol Lung Cell Mol Physiol. 2018 Nov 1;315(5):L697-L710. doi: 10.1152/ajplung.00543.2017. Epub 2018 Aug 9.

引用本文的文献

1
MiR-432-5p was involved in gestational diabetes mellitus by targeting COL5A2 regulation.MiR-432-5p通过靶向调控COL5A2参与妊娠期糖尿病。
Ir J Med Sci. 2025 Aug 12. doi: 10.1007/s11845-025-04059-3.
2
Epithelial Cell Dysfunction in Pulmonary Fibrosis: Mechanisms, Interactions, and Emerging Therapeutic Targets.肺纤维化中的上皮细胞功能障碍:机制、相互作用及新兴治疗靶点
Pharmaceuticals (Basel). 2025 May 28;18(6):812. doi: 10.3390/ph18060812.
3
Ferret model of bleomycin-induced lung injury shares features of human idiopathic pulmonary fibrosis.

本文引用的文献

1
Identifying potential biomarkers of idiopathic pulmonary fibrosis through machine learning analysis.通过机器学习分析鉴定特发性肺纤维化的潜在生物标志物。
Sci Rep. 2023 Oct 2;13(1):16559. doi: 10.1038/s41598-023-43834-z.
2
Asarinin attenuates bleomycin-induced pulmonary fibrosis by activating PPARγ.Asarinin 通过激活 PPARγ 减轻博来霉素诱导的肺纤维化。
Sci Rep. 2023 Sep 7;13(1):14706. doi: 10.1038/s41598-023-41933-5.
3
Single-nuclear transcriptome profiling identifies persistent fibroblast activation in hypertrophic and failing human hearts of patients with longstanding disease.
博来霉素诱导的肺损伤雪貂模型具有人类特发性肺纤维化的特征。
bioRxiv. 2025 May 14:2025.05.08.652970. doi: 10.1101/2025.05.08.652970.
单细胞转录组谱分析鉴定出患有长期疾病的肥厚和衰竭的人类心脏中持续的成纤维细胞活化。
Cardiovasc Res. 2023 Nov 25;119(15):2550-2562. doi: 10.1093/cvr/cvad140.
4
Dysregulated cross-talk between alveolar epithelial cells and stromal cells in idiopathic pulmonary fibrosis reduces epithelial regenerative capacity.特发性肺纤维化中肺泡上皮细胞与基质细胞之间的串扰失调会降低上皮再生能力。
Front Med (Lausanne). 2023 Aug 9;10:1182368. doi: 10.3389/fmed.2023.1182368. eCollection 2023.
5
Heterozygous FOXJ1 Mutations Cause Incomplete Ependymal Cell Differentiation and Communicating Hydrocephalus.杂合性 FOXJ1 突变导致不完全室管膜细胞分化和交通性脑积水。
Cell Mol Neurobiol. 2023 Nov;43(8):4103-4116. doi: 10.1007/s10571-023-01398-6. Epub 2023 Aug 24.
6
Adipose-derived mesenchymal stem cell therapy for reverse bleomycin-induced experimental pulmonary fibrosis.脂肪间充质干细胞治疗博来霉素诱导的实验性肺纤维化逆转。
Sci Rep. 2023 Aug 14;13(1):13183. doi: 10.1038/s41598-023-40531-9.
7
Control of telomere length in yeast by SUMOylated PCNA and the Elg1 PCNA unloader.酵母中端粒长度的控制通过 SUMO 化的 PCNA 和 Elg1 PCNA 卸载物实现。
Elife. 2023 Aug 2;12:RP86990. doi: 10.7554/eLife.86990.
8
Lung endothelial cells regulate pulmonary fibrosis through FOXF1/R-Ras signaling.肺内皮细胞通过 FOXF1/R-Ras 信号通路调节肺纤维化。
Nat Commun. 2023 May 4;14(1):2560. doi: 10.1038/s41467-023-38177-2.
9
Artificial neural network identified the significant genes to distinguish Idiopathic pulmonary fibrosis.人工神经网络鉴定了区分特发性肺纤维化的重要基因。
Sci Rep. 2023 Jan 21;13(1):1225. doi: 10.1038/s41598-023-28536-w.
10
Correspondence analysis for dimension reduction, batch integration, and visualization of single-cell RNA-seq data.基于单细胞 RNA-seq 数据降维、批次整合和可视化的对应分析。
Sci Rep. 2023 Jan 21;13(1):1197. doi: 10.1038/s41598-022-26434-1.