Department of Physics, School of Science, Kitasato University, 1-15-1 Kitasato, Minami-Ku, Sagamihara, Kanagawa, 252-0373, Japan.
Center for Disease Proteomics, School of Science, Kitasato University, 1-15-1 Kitasato, Minami-Ku, Sagamihara, Kanagawa, 252-0373, Japan.
Sci Rep. 2024 Jul 11;14(1):16043. doi: 10.1038/s41598-024-66763-x.
FtsZ is highly conserved among bacteria and plays an essential role in bacterial cell division. The tense conformation of FtsZ bound to GTP assembles into a straight filament via head-to-tail associations, and then the upper subunit of FtsZ hydrolyzes GTP bound to the lower FtsZ subunit. The subunit with GDP bound disassembles accompanied by a conformational change in the subunit from the tense to relaxed conformation. Although crystal structures of FtsZ derived from several bacterial species have been determined, the conformational change from the relaxed to tense conformation has only been observed in Staphylococcus aureus FtsZ (SaFtsZ). Recent cryo-electron microscopy analyses revealed the three-dimensional reconstruction of the protofilament, in which tense molecules assemble via head-to-tail associations. However, the lower resolution of the protofilament suggested that the flexibility of the FtsZ protomers between the relaxed and tense conformations caused them to form in less-strict alignments. Furthermore, this flexibility may also prevent FtsZs other than SaFtsZ from crystalizing in the tense conformation, suggesting that the flexibility of bacterial FtsZs differs. In this study, molecular dynamics simulations were performed using SaFtsZ and Bacillus subtilis FtsZ in several situations, which suggested that different features of the FtsZs affect their conformational stability.
FtsZ 在细菌中高度保守,在细菌细胞分裂中发挥着重要作用。与 GTP 结合的 FtsZ 呈紧张构象,通过头对头的缔合组装成直丝,然后 FtsZ 的上亚基水解与下亚基结合的 GTP。与 GDP 结合的亚基伴随着构象变化从紧张态到松弛态解组装。尽管已经确定了来自几种细菌物种的 FtsZ 的晶体结构,但仅在金黄色葡萄球菌 FtsZ(SaFtsZ)中观察到从松弛态到紧张态的构象变化。最近的低温电子显微镜分析揭示了原丝的三维重建,其中紧张分子通过头对头的缔合组装。然而,原丝的较低分辨率表明,松弛态和紧张态之间 FtsZ 原聚体的灵活性导致它们以不太严格的方式排列。此外,这种灵活性也可能阻止除 SaFtsZ 以外的 FtsZs 以紧张构象结晶,这表明细菌 FtsZs 的灵活性不同。在这项研究中,使用 SaFtsZ 和枯草芽孢杆菌 FtsZ 进行了几种情况下的分子动力学模拟,这表明 FtsZ 的不同特征影响其构象稳定性。