Scarcelli Nora, Garcia Davila Carmen, Couderc Marie, Castro Ruiz Diana, Estivals Guillain, Angulo Chavez Carlos Alberto Custodio, Acho Vasquez Hector, Alvarado Reategui Jhon Gregory, Vizcarra Bentos Tony, Mariac Cédric
DIADE Univ Montpellier, Cirad, IRD Montpellier France.
Laboratorio de Biología y Genética Molecular (LBGM) Instituto de Investigaciones de la Amazonía Peruana (IIAP) Iquitos Peru.
Ecol Evol. 2024 Jul 11;14(7):e11688. doi: 10.1002/ece3.11688. eCollection 2024 Jul.
Marupa ( Aublet 1775) is a tropical tree of the family Simaroubaceae. It is commonly used for its wood in the Amazonian forest, and it is an important species for restoring degraded environments. Yet, very little genetic resources are available to study this plant. In this paper, we sequenced for the first time the complete chloroplast genome of Marupa, using Oxford Nanopore long-read technology. The genome is 159,838 bp, includes 131 genes in total and presents a classic quadripartite structure. Its length and structure are similar to those of sister species of the Simaroubaceae family. A maximum likelihood phylogeny of the order Sapindale reveals that is well positioned in its family. This complete plastome is a first step towards a better analysis of Marupa future evolution.
玛鲁帕树(奥布莱特,1775年)是苦木科的一种热带树木。在亚马逊森林中,其木材被广泛使用,并且它是恢复退化环境的重要物种。然而,用于研究这种植物的遗传资源非常少。在本文中,我们首次使用牛津纳米孔长读长技术对玛鲁帕树的完整叶绿体基因组进行了测序。该基因组为159,838碱基对,总共包含131个基因,并呈现出经典的四分体结构。其长度和结构与苦木科姐妹物种的相似。无患子目最大似然系统发育显示,玛鲁帕树在其所属科中位置良好。这个完整的质体基因组是朝着更好地分析玛鲁帕树未来进化迈出的第一步。