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X 连锁的两个等位基因的选择及其在果蝇 Odsh 适应度成分分析中的应用。

Selection with two alleles of X-linkage and its application to the fitness component analysis of OdsH in Drosophila.

机构信息

Department of Ecology and Evolution, University of Chicago, Chicago, IL 60637, USA.

Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA.

出版信息

G3 (Bethesda). 2024 Sep 4;14(9). doi: 10.1093/g3journal/jkae157.

Abstract

In organisms with the XY sex-determination system, there is an imbalance in the inheritance and transmission of the X chromosome between males and females. Unlike an autosomal allele, an X-linked recessive allele in a female will have phenotypic effects on its male counterpart. Thus, genes located on the X chromosome are of particular interest to researchers in molecular evolution and genetics. Here we present a model for selection with two alleles of X-linkage to understand fitness components associated with genes on the X chromosome. We apply this model to the fitness analysis of an X-linked gene, OdsH (16D), in the fruit fly Drosophila melanogaster. The function of OdsH is involved in sperm production and the gene is rapidly evolving under positive selection. Using site-directed gene targeting, we generated functional and defective OdsH variants tagged with the eye-color marker gene white. We compare the allele frequency changes of the two OdsH variants, each directly competing against a wild-type OdsH allele in concurrent but separate experimental populations. After 20 generations, the two genetically modified OdsH variants displayed a 40% difference in allele frequencies, with the functional OdsH variant demonstrating an advantage over the defective variant. Using maximum likelihood estimation, we determined the fitness components associated with the OdsH alleles in males and females. Our analysis revealed functional aspects of the fitness determinants associated with OdsH, and that sex-specific fertility and viability consequences both contribute to selection on an X-linked gene.

摘要

在具有 XY 性别决定系统的生物体中,X 染色体在男性和女性之间的遗传和传递存在不平衡。与常染色体等位基因不同,女性的 X 连锁隐性等位基因会对其男性对应物产生表型效应。因此,位于 X 染色体上的基因特别引起了分子进化和遗传学研究人员的兴趣。在这里,我们提出了一个具有两个 X 连锁等位基因的选择模型,以了解与 X 染色体上基因相关的适合度成分。我们将该模型应用于果蝇 Drosophila melanogaster 中 X 连锁基因 OdsH(16D)的适合度分析。OdsH 的功能涉及精子生成,该基因在正选择下快速进化。使用定点基因靶向,我们生成了带有眼色标记基因 white 的功能和缺陷 OdsH 变体。我们比较了两个 OdsH 变体的等位基因频率变化,每个变体都直接与野生型 OdsH 等位基因在同时但分开的实验种群中竞争。经过 20 代,两个遗传修饰的 OdsH 变体的等位基因频率差异达到 40%,功能 OdsH 变体相对于缺陷变体具有优势。通过最大似然估计,我们确定了与雄性和雌性 OdsH 等位基因相关的适合度成分。我们的分析揭示了与 OdsH 相关的适合度决定因素的功能方面,并且性特异性生育力和活力后果都有助于对 X 连锁基因的选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831c/11537805/b64e05cc28e8/jkae157f1.jpg

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