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脉冲场凝胶电泳在伊朗致病菌种分子鉴定中的应用:一种快速可靠的方法。

Application of pulsed-field gel electrophoresis for molecular identification of pathogenic species in Iran: a rapid and reliable method.

作者信息

Khaki Pejvak, Bagherpour Mohsen, Gharakhani Mehdi, Sadat Soltani Maryam, Shahcheraghi Fereshteh, Sadat Nikbin Vajihe

机构信息

Department of Microbiology, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran.

Department of Microbiology, Saveh Branch, Islamic Azad University, Saveh, Iran.

出版信息

Iran J Microbiol. 2024 Jun;16(3):323-328. doi: 10.18502/ijm.v16i3.15763.


DOI:10.18502/ijm.v16i3.15763
PMID:39005606
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11245352/
Abstract

BACKGROUND AND OBJECTIVES: Leptospirosis is a zoonotic disease caused by pathogenic serovars. The genus cannot differentiated by conventional techniques. However, identity determination of pathogenic serovar is precious of public health problems and epidemiological studies. Pulsed-field gel electrophoresis facilitates rapid identification of to the serovar levels. MATERIALS AND METHODS: In this study, we employed PFGE to evaluate 28 isolates, with animal, human and environmental origin, obtained from Razi Vaccine and Serum Research Institute of Karaj, Iran. PFGE patterns of 28 serovars were generated using the I restriction enzyme in comparison with the lambda ladder. RESULTS: Out of 28 serovars evaluated, we identified 22 different pulsed types, designated P1-P22. Out of 22 pulse groups, 3 were found to be a common type, but others were a single Type. Groups consisting of the common type were P3, P9, P14, and P16. The results showed that the discriminatory index of PFGE by I enzyme was 0.99, demonstrating heterogeneous differentiation among serovar members. CONCLUSION: The PFGE methodology used in this study showed excellent interlaboratory report usability, rapid, reliable, enabling standardization and data sharing between laboratories.

摘要

背景与目的:钩端螺旋体病是一种由致病性血清型引起的人畜共患病。传统技术无法区分该属。然而,致病性血清型的鉴定对于公共卫生问题和流行病学研究至关重要。脉冲场凝胶电泳有助于快速将其鉴定到血清型水平。 材料与方法:在本研究中,我们采用脉冲场凝胶电泳评估了从伊朗卡拉季的拉齐疫苗和血清研究所获得的28株钩端螺旋体分离株,这些分离株来自动物、人类和环境。使用I酶与λ梯度相比,生成了28种血清型的脉冲场凝胶电泳图谱。 结果:在评估的28种血清型中,我们鉴定出22种不同的脉冲类型,命名为P1 - P22。在22个脉冲组中,发现3个为常见类型,其他为单一类型。由常见类型组成的组为P3、P9、P14和P16。结果表明,I酶脉冲场凝胶电泳的鉴别指数为0.99,表明血清型成员之间存在异质性分化。 结论:本研究中使用的脉冲场凝胶电泳方法显示出出色的实验室间报告可用性,快速、可靠,能够实现实验室之间的标准化和数据共享。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/787e/11245352/df65a0e71862/IJM-16-323-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/787e/11245352/eefbd33ca4ba/IJM-16-323-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/787e/11245352/df65a0e71862/IJM-16-323-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/787e/11245352/eefbd33ca4ba/IJM-16-323-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/787e/11245352/df65a0e71862/IJM-16-323-g002.jpg

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[1]
Application of pulsed-field gel electrophoresis for molecular identification of pathogenic species in Iran: a rapid and reliable method.

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引用本文的文献

[1]
Trends and advances in , a bibliometric analysis.

Front Microbiol. 2025-1-8

本文引用的文献

[1]
Leptospiral Infection, Pathogenesis and Its Diagnosis-A Review.

Pathogens. 2021-2-1

[2]
Pathogenic Leptospira and their animal reservoirs: testing host specificity through experimental infection.

Sci Rep. 2020-4-29

[3]
Pulsed-field gel electrophoresis (PFGE): A review of the "gold standard" for bacteria typing and current alternatives.

Infect Genet Evol. 2019-6-22

[4]
Revisiting the taxonomy and evolution of pathogenicity of the genus Leptospira through the prism of genomics.

PLoS Negl Trop Dis. 2019-5-23

[5]
Pulsed Field Gel Electrophoresis: Past, present, and future.

Anal Biochem. 2019-2-28

[6]
Advances and challenges in barcoding pathogenic and environmental Leptospira.

Parasitology. 2018-4

[7]
Profiling of Leptospira interrogans, L. santarosai, L. meyeri and L. borgpetersenii by SE-AFLP, PFGE and susceptibility testing--a continuous attempt at species and serovar differentiation.

Emerg Microbes Infect. 2016-3-9

[8]
An epidemiological comparative study on diagnosis of rodent leptospirosis in Mazandaran Province, northern Iran.

Epidemiol Health. 2015-2-23

[9]
Molecular typing of Leptospira interrogans strains isolated from Rattus tanezumi in Guizhou Province, Southwest of China.

Biomed Environ Sci. 2012-10

[10]
Recombinant vaccines against leptospirosis.

Hum Vaccin. 2011-11

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