Department of Biochemistry, School of Sciences, Gujarat University, Ahmedabad, Gujarat, India.
Department of Zoology, BMTC, Human Genetics and WLC, School of Sciences, Gujarat University, Ahmedabad, Gujarat, India.
Protein J. 2024 Aug;43(4):819-833. doi: 10.1007/s10930-024-10212-1. Epub 2024 Jul 15.
Plasmodium falciparum (P. falciparum), which causes the most severe form of malaria, if left untreated, has 24 h window in which it can cause severe illness and even death. The aim of this study was to create the most comprehensive and informative secretory-proteome possible by combining high-accuracy and high-sensitivity protein identification technology. In this study, we used Plasmodium falciparum 3D7 (Pf3D7) as the model parasite to develop a label-free quantification proteomic strategy with the main goal of identifying Pf3D7 proteins that are supposed to be secreted outside the infected erythrocytes in the spent media culture during the in-vitro study. The spent culture media supernatant was subjected to differential and ultra-centrifugation steps followed by total protein extraction, estimation, and in-solution digestion using trypsin, digested peptides were analyzed using Nano-LC coupled with ESI for MS/MS. MS/MS spectra were processed using Maxquant software (v2.1.4.0.). Non-infected erythrocytes incubated spent cultured media supernatant were considered as control. Out of discovered 38 proteins, proteins belonging to P. falciparum spp. were EGF-like protein (C0H544), Endoplasmic reticulum chaperone GRP170 (C0H5H0), Small GTP-binding protein sar1 (Q8I1S0), Erythrocyte membrane protein 1, PfEMP1 (Q8I639), aldehyde reductase (Q8ID61), Conserved Plasmodium proteins (Q8IEH3, Q8ILD1), Antigen 332, DBL-like protein (Q8IHN4), Fe-S cluster assembly protein (Q8II78), identified and chosen for further in-depth investigation. This study highlights the value of secretory Plasmodium proteins play crucial roles in various aspects of the disease progression and host-pathogen interactions which can serve as diagnostic markers for malaria infection.
疟原虫(Plasmodium falciparum),如果不加以治疗,会引起最严重的疟疾形式,它有 24 小时的窗口期,在此期间它可能导致严重疾病甚至死亡。本研究的目的是通过结合高精度和高灵敏度的蛋白质鉴定技术,创建最全面和信息丰富的分泌蛋白质组。在这项研究中,我们使用恶性疟原虫 3D7(Pf3D7)作为模型寄生虫,开发了一种无标签定量蛋白质组学策略,主要目标是鉴定 Pf3D7 蛋白质,这些蛋白质应该在体外研究中在感染的红细胞外分泌到培养上清液中。将培养上清液进行差速和超速离心步骤,然后进行总蛋白提取、估计和在溶液中用胰蛋白酶消化,用纳升液相色谱与电喷雾串联质谱(ESI-MS/MS)分析消化肽。使用 Maxquant 软件(v2.1.4.0)处理 MS/MS 谱。未感染的红细胞孵育培养上清液被视为对照。在发现的 38 种蛋白质中,属于疟原虫属的蛋白质有表皮生长因子样蛋白(C0H544)、内质网伴侣 GRP170(C0H5H0)、小 GTP 结合蛋白 sar1(Q8I1S0)、红细胞膜蛋白 1、PfEMP1(Q8I639)、醛还原酶(Q8ID61)、保守的疟原虫蛋白(Q8IEH3、Q8ILD1)、抗原 332、DBL 样蛋白(Q8IHN4)、铁硫簇组装蛋白(Q8II78)。这些蛋白质被鉴定出来,并选择进行进一步的深入研究。本研究强调了分泌性疟原虫蛋白在疾病进展和宿主-病原体相互作用的各个方面发挥着重要作用,它们可以作为疟疾感染的诊断标志物。