School of Natural Sciences, Department of Bioscience, Technical University of Munich, Garching, Germany.
Systems Biophysics Center for Nano-Science and Origins Cluster Initiative, Department of Physics, Ludwig-Maximilians-Universität München, Munich, Germany.
Nat Chem. 2024 Aug;16(8):1240-1249. doi: 10.1038/s41557-024-01570-5. Epub 2024 Jul 16.
One of science's greatest challenges is determining how life can spontaneously emerge from a mixture of molecules. A complicating factor is that life and its molecules are inherently unstable-RNA and proteins are prone to hydrolysis and denaturation. For the de novo synthesis of life or to better understand its emergence at its origin, selection mechanisms are needed for unstable molecules. Here we present a chemically fuelled dynamic combinatorial library to model RNA oligomerization and deoligomerization and shine new light on selection and purification mechanisms under kinetic control. In the experiments, oligomers can only be sustained by continuous production. Hybridization is a powerful tool for selecting unstable molecules, offering feedback on oligomerization and deoligomerization rates. Moreover, we find that templation can be used to purify libraries of oligomers. In addition, template-assisted formation of oligomers within coacervate-based protocells changes its compartment's physical properties, such as their ability to fuse. Such reciprocal coupling between oligomer production and physical properties is a key step towards synthetic life.
科学面临的最大挑战之一是确定生命如何能够从分子混合物中自发出现。一个复杂的因素是,生命及其分子本质上是不稳定的——RNA 和蛋白质容易发生水解和变性。为了从头合成生命,或者更好地理解生命在起源时的出现,不稳定分子需要有选择机制。在这里,我们提出了一个化学驱动的动态组合文库,以模拟 RNA 寡聚化和解聚,并在动力学控制下为选择和纯化机制提供新的视角。在实验中,只有通过连续的生产才能维持寡聚物。杂交是选择不稳定分子的有力工具,为寡聚化和解聚速率提供反馈。此外,我们发现模板可以用于纯化寡聚物文库。此外,在基于凝聚物的原细胞内模板辅助形成寡聚物会改变其隔室的物理性质,例如它们融合的能力。这种寡聚体产生和物理性质之间的相互偶联是迈向合成生命的关键一步。