Ministry of Education, Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Guilin, China.
Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, Guilin, China.
Foodborne Pathog Dis. 2024 Oct;21(10):653-661. doi: 10.1089/fpd.2024.0043. Epub 2024 Jul 25.
() is a pathogen capable of causing severe diseases and exhibiting resistance to multiple antibiotics. However, there is a significant lack of comprehensive research on the global prevalence of its antibiotic resistance genes (ARGs). This study provided a comprehensive analysis of ARGs in , using 113,842 genome sequences from the National Center for Biotechnology Information database. The results revealed that a significant majority (84%) of these genomes harbored at least one ARG, with a total of 389,464 ARG sequences identified across 19 major types and 103 subtypes. These ARGs exhibited varied abundances and diversities, linked primarily to clinical cases worldwide. ARGs for fluoroquinolones, multidrug resistance, bacitracin, tetracyclines, beta-lactams, and aminoglycosides were notably abundant, ranging from 3.16 × 10 to 1.49 copies of ARG per million bp. Variations in the abundance and diversity of ARGs were observed between countries, with middle- and low-income countries showing higher gene abundance but lower diversity compared with high-income countries. Temporal analysis over 30 years showed a fluctuating decline in ARG abundance alongside an increase in diversity, suggesting evolving resistance mechanisms. The study also explored the role of mobile genetic elements in ARG dissemination, finding a substantial proportion of ARG subtypes associated with plasmids and insertion sequence elements, indicating their potential for spread across borders. The global distribution of mobile ARGs was further analyzed, revealing the extensive reach of certain ARGs across countries. This research provides valuable insights into the prevalence and dissemination of antibiotic resistance in on a global scale, aiding in the development of effective monitoring and control strategies to combat ARGs in and other pathogens.
( )是一种能够引起严重疾病并表现出对多种抗生素耐药的病原体。然而,目前全球范围内关于其抗生素耐药基因(ARGs)的流行情况缺乏全面研究。本研究利用美国国立生物技术信息中心数据库中的 113842 个基因组序列,对 进行了全面的 ARG 分析。结果表明,这些基因组中绝大多数(84%)至少携带一个 ARG,共鉴定出 19 种主要类型和 103 种亚型的 389464 个 ARG 序列。这些 ARGs 的丰度和多样性差异显著,主要与全球范围内的临床病例有关。氟喹诺酮类、多药耐药性、杆菌肽、四环素类、β-内酰胺类和氨基糖苷类的 ARG 尤为丰富,ARG 丰度范围为每百万 bp 中有 3.16×10 到 1.49 个拷贝。各国之间 ARG 丰度和多样性存在差异,中低收入国家的基因丰度较高,但与高收入国家相比,多样性较低。30 年来的时间分析显示,ARG 丰度呈波动下降趋势,多样性呈上升趋势,表明耐药机制在不断演变。该研究还探讨了移动遗传元件在 ARG 传播中的作用,发现大量 ARG 亚型与质粒和插入序列元件有关,表明它们有在跨国界传播的潜力。进一步分析了移动 ARGs 的全球分布,揭示了某些 ARGs 在各国之间的广泛传播。本研究为了解全球范围内 中抗生素耐药的流行和传播提供了有价值的见解,有助于制定有效的监测和控制策略,以对抗 中的 ARGs 和其他病原体。