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靶向耐碳青霉烯类细菌的新型噬菌体的分离与鉴定

Isolation and Characterization of Novel Bacteriophages to Target Carbapenem-Resistant .

作者信息

Choi Yoon-Jung, Kim Shukho, Shin Minsang, Kim Jungmin

机构信息

Department of Microbiology, School of Medicine, Kyungpook National University, Daegu 41944, Republic of Korea.

出版信息

Antibiotics (Basel). 2024 Jun 29;13(7):610. doi: 10.3390/antibiotics13070610.

Abstract

The spread of multidrug-resistant in hospitals and nursing homes poses serious healthcare challenges. Therefore, we aimed to isolate and characterize lytic bacteriophages targeting carbapenem-resistant (CRAB). Of the 21 isolated phages, 11 exhibited potent lytic activities against clinical isolates of CRAB. Based on host spectrum and RAPD-PCR results, 11 phages were categorized into four groups. Three phages (vB_AbaP_W8, vB_AbaSi_W9, and vB_AbaSt_W16) were further characterized owing to their antibacterial efficacy, morphology, and whole-genome sequence and were found to lyse 37.93%, 89.66%, and 37.93%, respectively, of the 29 tested CRAB isolates. The lytic spectrum of phages varied depending on the multilocus sequence type (MLST) of the CRAB isolates. The three phages contained linear double-stranded DNA genomes, with sizes of 41,326-166,741 bp and GC contents of 34.4-35.6%. Genome-wide phylogenetic analysis and single gene-based tree construction revealed no correlation among the three phages. Moreover, no genes were associated with lysogeny, antibiotic resistance, or bacterial toxins. Therefore, the three novel phages represent potential candidates for phage therapy against CRAB infections.

摘要

多重耐药菌在医院和疗养院的传播给医疗保健带来了严峻挑战。因此,我们旨在分离并鉴定针对耐碳青霉烯类鲍曼不动杆菌(CRAB)的裂解性噬菌体。在分离出的21株噬菌体中,有11株对CRAB临床分离株表现出强大的裂解活性。根据宿主谱和随机扩增多态性DNA-PCR(RAPD-PCR)结果,11株噬菌体被分为四组。由于其抗菌效果、形态和全基因组序列,对三株噬菌体(vB_AbaP_W8、vB_AbaSi_W9和vB_AbaSt_W16)进行了进一步鉴定,发现它们分别能裂解29株受试CRAB分离株中的37.93%、89.66%和37.93%。噬菌体的裂解谱因CRAB分离株的多位点序列类型(MLST)而异。这三株噬菌体含有线性双链DNA基因组,大小为41,326 - 166,741 bp,GC含量为34.4 - 35.6%。全基因组系统发育分析和基于单基因的系统发育树构建表明,这三株噬菌体之间没有相关性。此外,没有与溶原性、抗生素耐药性或细菌毒素相关的基因。因此,这三株新型噬菌体是针对CRAB感染进行噬菌体治疗的潜在候选者。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31b9/11273472/9608c66cb3c1/antibiotics-13-00610-g001a.jpg

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