Division of Ophthalmology, Hadassah Medical Center, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem 91120, Israel.
Genes (Basel). 2024 Jul 16;15(7):926. doi: 10.3390/genes15070926.
Inherited retinal diseases (IRDs) are extremely heterogeneous with at least 350 causative genes, complicating the process of genetic diagnosis. We analyzed samples of 252 index cases with IRDs using the Blueprint Genetics panel for "Retinal Dystrophy" that includes 351 genes. The cause of disease could be identified in 55% of cases. A clear difference was obtained between newly recruited cases (74% solved) and cases that were previously analyzed by panels or whole exome sequencing (26% solved). As for the mode of inheritance, 75% of solved cases were autosomal recessive (AR), 10% were X-linked, 8% were autosomal dominant, and 7% were mitochondrial. Interestingly, in 12% of solved cases, structural variants (SVs) were identified as the cause of disease. The most commonly identified genes were , and , and the most common mutations were -c.1297_1298ins353 and -c.1355_1356del. In line with our previous IRD carrier analysis, we identified heterozygous AR mutations that were not the cause of disease in 36% of cases. The studied IRD panel was found to be efficient in gene identification. Some variants were misinterpreted by the pipeline, and therefore, multiple analysis tools are recommended to obtain a more accurate annotation of potential disease-causing variants.
遗传性视网膜疾病(IRDs)具有极强的异质性,至少有 350 个致病基因,这使得基因诊断变得复杂。我们使用Blueprint Genetics 的“视网膜营养不良”面板分析了 252 名 IRD 索引病例的样本,该面板包含 351 个基因。在 55%的病例中可以确定病因。新招募的病例(74%解决)和以前通过面板或全外显子组测序分析的病例(26%解决)之间存在明显差异。至于遗传方式,75%的已解决病例为常染色体隐性遗传(AR),10%为 X 连锁遗传,8%为常染色体显性遗传,7%为线粒体遗传。有趣的是,在 12%的已解决病例中,结构变异(SVs)被确定为疾病的原因。最常被识别的基因是、和,最常见的突变是 -c.1297_1298ins353 和 -c.1355_1356del。与我们之前的 IRD 携带者分析一致,我们在 36%的病例中发现了杂合 AR 突变,但不是疾病的原因。研究中的 IRD 面板被发现对基因识别非常有效。一些变体被分析工具错误地解释了,因此建议使用多种分析工具来更准确地注释潜在的致病变体。