In recent years, the growing demand for algae in Western countries is due to their richness in nutrients and bioactive compounds, and their use as ingredients for foods, cosmetics, nutraceuticals, fertilizers, biofuels,, etc. Evaluation of the qualitative characteristics of algae involves assessing their physicochemical and nutritional components to determine their suitability for specific end uses, but this assessment is generally performed using destructive, expensive, and time-consuming traditional chemical analyses, and requires sample preparation. The hyperspectral imaging (HSI) technique has been successfully applied in food quality assessment and control and has the potential to overcome the limitations of traditional biochemical methods. In this study, the nutritional profile (proteins, lipids, and fibers) of seventeen edible macro- and microalgae species widely grown throughout the world were investigated using traditional methods. Moreover, a shortwave infrared (SWIR) hyperspectral imaging device and artificial neural network (ANN) algorithms were used to develop multi-species models for proteins, lipids, and fibers. The predictive power of the models was characterized by different metrics, which showed very high predictive performances for all nutritional parameters (for example, R = 0.9952, 0.9767, 0.9828 for proteins, lipids, and fibers, respectively). Our results demonstrated the ability of SWIR hyperspectral imaging coupled with ANN algorithms in quantifying biomolecules in algal species in a fast and sustainable way.