Okella Hedmon, Odongo Steven, Vertommen Didier, Okello Emmanuel
Veterinary Medicine Teaching and Research Center, School of Veterinary Medicine, University of California, Davis, CA 93274, USA.
Department of Biotechnical and Diagnostic Sciences, College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala P.O. Box 7062, Uganda.
Pharmaceutics. 2024 Jun 22;16(7):850. doi: 10.3390/pharmaceutics16070850.
The global surge in multi-drug resistant bacteria, including extended-spectrum β-lactamase (ESBL)-producing has led to a growing need for new antibacterial compounds. Despite being promising, the potential of fish-derived antimicrobial peptides (AMPs) in combating ESBL-producing is largely unexplored. In this study, native African catfish antimicrobial peptides (NACAPs) were extracted from the skin mucus of farmed African catfish, , using a combination of 10% acetic acid solvent hydrolysis, 5 kDa ultrafiltration, and C hydrophobic interaction chromatography. Peptides were then sequenced using Orbitrap Fusion Lumos Tribrid Mass Spectrometry. The identified peptides were screened for potential antibacterial activity using Random Forest and AdaBoost machine learning algorithms. The most promising peptide was chemically synthesized and evaluated in vitro for safety on rabbit red blood cells and activity against ESBL-producing (ATCC 35218) utilizing spot-on-lawn and broth dilution methods. Eight peptides ranging from 13 to 22 amino acids with molecular weights between 968.42 and 2434.11 Da were identified. Peptide NACAP-II was non-hemolytic to rabbit erythrocytes ( > 0.05) with a zone of inhibition (ZOI) of 22.7 ± 0.9 mm and a minimum inhibitory concentration (MIC) of 91.3 ± 1.2 μg/mL. The peptide is thus a candidate antibacterial compound with enormous potential applications in the pharmaceutical industry. However, further studies are still required to establish an upscale production strategy and optimize its activity and safety in vivo.
包括产超广谱β-内酰胺酶(ESBL)细菌在内的多重耐药菌在全球范围内激增,这导致对新型抗菌化合物的需求日益增长。尽管鱼类来源的抗菌肽(AMPs)很有前景,但它们在对抗产ESBL细菌方面的潜力在很大程度上尚未得到探索。在本研究中,采用10%乙酸溶剂水解、5 kDa超滤和C8疏水相互作用色谱相结合的方法,从养殖的非洲鲶鱼(Clarias gariepinus)的皮肤黏液中提取天然非洲鲶鱼抗菌肽(NACAPs)。然后使用Orbitrap Fusion Lumos Tribrid质谱仪对肽段进行测序。使用随机森林和AdaBoost机器学习算法筛选鉴定出的肽段的潜在抗菌活性。对最有前景的肽段进行化学合成,并利用点滴平板法和肉汤稀释法在体外评估其对兔红细胞的安全性以及对产ESBL细菌(ATCC 35218)的活性。鉴定出了8种肽段,其氨基酸长度在13至22个之间,分子量在968.42至2434.11 Da之间。肽段NACAP-II对兔红细胞无溶血作用(p>0.05),抑菌圈(ZOI)为22.7±0.9 mm,最低抑菌浓度(MIC)为91.3±1.2 μg/mL。因此,该肽是一种在制药行业具有巨大潜在应用价值的候选抗菌化合物。然而,仍需要进一步研究来建立扩大规模的生产策略,并优化其体内活性和安全性。