Xiao Xiongjie, Wang Qianqian, Chai Xin, Zhang Xu, Jiang Bin, Liu Maili
State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan National Laboratory for Optoelectronics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement of Science and Technology, Chinese Academy of Sciences, Wuhan, China.
University of Chinese Academy of Sciences, Beijing, China.
Commun Chem. 2024 Jul 31;7(1):167. doi: 10.1038/s42004-024-01251-x.
Metabolomics plays a crucial role in understanding metabolic processes within biological systems. Using specific pulse sequences, NMR-based metabolomics detects small and macromolecular metabolites that are altered in blood samples. Here we proposed a method called spectral editing neural network, which can effectively edit and separate the spectral signals of small and macromolecules in H NMR spectra of serum and plasma based on the linewidth of the peaks. We applied the model to process the H NMR spectra of plasma and serum. The extracted small and macromolecular spectra were then compared with experimentally obtained relaxation-edited and diffusion-edited spectra. Correlation analysis demonstrated the quantitative capability of the model in the extracted small molecule signals from H NMR spectra. The principal component analysis showed that the spectra extracted by the model and those obtained by NMR spectral editing methods reveal similar group information, demonstrating the effectiveness of the model in signal extraction.
代谢组学在理解生物系统中的代谢过程方面起着至关重要的作用。基于核磁共振(NMR)的代谢组学使用特定的脉冲序列来检测血液样本中发生变化的小分子和大分子代谢物。在此,我们提出了一种名为光谱编辑神经网络的方法,该方法可以基于峰的线宽有效地编辑和分离血清和血浆的氢核磁共振(H NMR)谱中小分子和大分子的光谱信号。我们应用该模型来处理血浆和血清的H NMR谱。然后将提取的小分子和大分子光谱与实验获得的弛豫编辑和扩散编辑光谱进行比较。相关性分析证明了该模型在从H NMR谱中提取小分子信号方面的定量能力。主成分分析表明,该模型提取的光谱与通过NMR光谱编辑方法获得的光谱揭示了相似的组信息,证明了该模型在信号提取方面的有效性。