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PPDiffuse: A Quantitative Prediction Tool for Diffusion of Charged Polymers in a Nanopore.

作者信息

Hoogerheide David P

机构信息

National Institute of Standards and Technology, Gaithersburg, MD 20899, USA.

出版信息

J Res Natl Inst Stand Technol. 2020 Jun 19;125:125018. doi: 10.6028/jres.125.018. eCollection 2020.

DOI:10.6028/jres.125.018
PMID:39081564
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11239191/
Abstract
摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/241ac8f5814a/jres-Image004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/feb7024f9afd/jres-Image001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/31911a4e4dd4/jres-Image002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/dcd78cc84aa1/jres-Image003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/241ac8f5814a/jres-Image004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/feb7024f9afd/jres-Image001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/31911a4e4dd4/jres-Image002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/dcd78cc84aa1/jres-Image003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b6b4/11239191/241ac8f5814a/jres-Image004.jpg

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本文引用的文献

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Nanoscale. 2020 May 28;12(20):11070-11078. doi: 10.1039/d0nr01577f.
2
Sequence diversity of tubulin isotypes in regulation of the mitochondrial voltage-dependent anion channel.微管蛋白同工型在调控线粒体电压依赖性阴离子通道中的序列多样性。
J Biol Chem. 2018 Jul 13;293(28):10949-10962. doi: 10.1074/jbc.RA117.001569. Epub 2018 May 18.
3
Real-Time Nanopore-Based Recognition of Protein Translocation Success.
用 VDAC 纳米孔探索与脂类相关的膜结合 α-突触核蛋白构象。
Biochim Biophys Acta Biomembr. 2021 Sep 1;1863(9):183643. doi: 10.1016/j.bbamem.2021.183643. Epub 2021 May 7.
4
Tunable Electromechanical Nanopore Trap Reveals Populations of Peripheral Membrane Protein Binding Conformations.可调谐机电纳米孔阱揭示外周膜蛋白结合构象群体
ACS Nano. 2021 Jan 26;15(1):989-1001. doi: 10.1021/acsnano.0c07672. Epub 2020 Dec 28.
基于实时纳米孔的蛋白质转位成功识别。
Biophys J. 2018 Feb 27;114(4):772-776. doi: 10.1016/j.bpj.2017.12.019. Epub 2018 Jan 12.
4
Mechanism of α-synuclein translocation through a VDAC nanopore revealed by energy landscape modeling of escape time distributions.通过逃逸时间分布的能量景观建模揭示α-突触核蛋白穿过 VDAC 纳米孔的转移机制。
Nanoscale. 2017 Jan 7;9(1):183-192. doi: 10.1039/c6nr08145b. Epub 2016 Dec 1.
5
Escape of DNA from a weakly biased thin nanopore: experimental evidence for a universal diffusive behavior.DNA 从弱偏置薄纳米孔中的逃逸：通用扩散行为的实验证据。
Phys Rev Lett. 2013 Dec 13;111(24):248301. doi: 10.1103/PhysRevLett.111.248301. Epub 2013 Dec 12.
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D³: Data-Driven Documents.D³：数据驱动文档。
IEEE Trans Vis Comput Graph. 2011 Dec;17(12):2301-9. doi: 10.1109/TVCG.2011.185.
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