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荟萃分析确定了与多发性硬化症相关的常见肠道微生物群。

Meta-analysis identifies common gut microbiota associated with multiple sclerosis.

作者信息

Lin Qingqi, Dorsett Yair, Mirza Ali, Tremlett Helen, Piccio Laura, Longbrake Erin E, Choileain Siobhan Ni, Hafler David A, Cox Laura M, Weiner Howard L, Yamamura Takashi, Chen Kun, Wu Yufeng, Zhou Yanjiao

机构信息

Department of Computer Science and Engineering, University of Connecticut, Storrs, CT, USA.

Department of Medicine, University of Connecticut Health Center, Farmington, CT, USA.

出版信息

Genome Med. 2024 Jul 31;16(1):94. doi: 10.1186/s13073-024-01364-x.

Abstract

BACKGROUND

Previous studies have identified a diverse group of microbial taxa that differ between patients with multiple sclerosis (MS) and the healthy population. However, interpreting findings on MS-associated microbiota is challenging, as there is no true consensus. It is unclear whether there is gut microbiota commonly altered in MS across studies.

METHODS

To answer this, we performed a meta-analysis based on the 16S rRNA gene sequencing data from seven geographically and technically diverse studies comprising a total of 524 adult subjects (257 MS and 267 healthy controls). Analysis was conducted for each individual study after reprocessing the data and also by combining all data together. The blocked Wilcoxon rank-sum test and linear mixed-effects regression were used to identify differences in microbial composition and diversity between MS and healthy controls. Network analysis was conducted to identify bacterial correlations. A leave-one-out sensitivity analysis was performed to ensure the robustness of the findings.

RESULTS

The microbiome community structure was significantly different between studies. Re-analysis of data from individual studies revealed a lower relative abundance of Prevotella in MS across studies, compared to controls. Meta-analysis found that although alpha and beta diversity did not differ between MS and controls, a higher abundance of Actinomyces and a lower abundance of Faecalibacterium were reproducibly associated with MS. Additionally, network analysis revealed that the recognized negative Bacteroides-Prevotella correlation in controls was disrupted in patients with MS.

CONCLUSIONS

Our meta-analysis identified common gut microbiota associated with MS across geographically and technically diverse studies.

摘要

背景

先前的研究已经确定了一组不同的微生物分类群,它们在多发性硬化症(MS)患者和健康人群之间存在差异。然而,由于没有真正的共识,解释与MS相关的微生物群的研究结果具有挑战性。目前尚不清楚在各项研究中,MS患者的肠道微生物群是否普遍发生改变。

方法

为了回答这个问题,我们基于来自7项在地理和技术上各不相同的研究中的16S rRNA基因测序数据进行了一项荟萃分析,这些研究总共纳入了524名成年受试者(257名MS患者和267名健康对照)。在对数据进行重新处理后,对每项单独的研究进行了分析,同时也将所有数据合并在一起进行分析。使用分组威尔科克森秩和检验和线性混合效应回归来确定MS患者和健康对照之间微生物组成和多样性的差异。进行网络分析以确定细菌之间的相关性。进行了留一法敏感性分析以确保研究结果的稳健性。

结果

不同研究之间的微生物群落结构存在显著差异。对各个研究的数据进行重新分析发现,与对照组相比,在各项研究中MS患者体内普雷沃氏菌的相对丰度较低。荟萃分析发现,虽然MS患者和对照组之间的α和β多样性没有差异,但放线菌丰度较高和粪杆菌丰度较低与MS反复相关。此外,网络分析显示,对照组中公认的拟杆菌-普雷沃氏菌负相关在MS患者中被破坏。

结论

我们的荟萃分析在地理和技术上各不相同的研究中确定了与MS相关的常见肠道微生物群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1662/11293023/8cdb236636e1/13073_2024_1364_Fig1_HTML.jpg

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