Petropoulos Vasilis, Martinez-Fernandez Lara, Uboldi Lorenzo, Maiuri Margherita, Cerullo Giulio, Balanikas Evangelos, Markovitsi Dimitra
Dipartimento di Fisica, Politecnico di Milano Piazza Leonardo da Vinci 32 I-20133 Milano Italy
Instituto de Química Física Blas Cabrera, Consejo Superior de Investigaciones Científicas Calle Serrano 119 Madrid 28006 Spain
Chem Sci. 2024 Jun 27;15(30):12098-12107. doi: 10.1039/d4sc02514h. eCollection 2024 Jul 31.
Using as showcase the DNA dinucleotide 5'-dTpdG-3', in which the thymine (T) is located at the 5' end with respect to the guanine (G), we study the photoinduced electronic relaxation of coupled chromophores in solution with an unprecedented refinement. On the one hand, transient absorption spectra are recorded from 20 fs to 45 ps over the 330-650 nm range with a temporal resolution of 30 fs; on the other hand, quantum chemistry calculations determine the ground state geometry of the 4 possible conformers with stacked nucleobases, the associated Franck-Condon states, and map the relaxation pathways leading to excited state minima. Important spectral changes occurring before 100 fs are correlated with concomitant G → T charge transfer and T → G energy transfer processes. The lifetime of the excited charge transfer state is only 5 ps and the absorption spectrum of a long-lived nπ*T state is detected. Our experimental results match the transient spectral properties computed for the - conformer of 5'-dTpdG-3', which is characterized by the lowest ground state energy and differs from that encountered in B-form duplexes.
以DNA二核苷酸5'-dTpdG-3'为示例,其中胸腺嘧啶(T)相对于鸟嘌呤(G)位于5'端,我们以前所未有的精细程度研究了溶液中耦合发色团的光致电子弛豫。一方面,在330 - 650 nm范围内以30 fs的时间分辨率记录了从20 fs到45 ps的瞬态吸收光谱;另一方面,量子化学计算确定了具有堆积核碱基的4种可能构象异构体的基态几何结构、相关的弗兰克 - 康登态,并绘制了导致激发态最小值的弛豫途径。在100 fs之前发生的重要光谱变化与伴随的G→T电荷转移和T→G能量转移过程相关。激发电荷转移态的寿命仅为5 ps,并检测到了长寿命nπ*T态的吸收光谱。我们的实验结果与为5'-dTpdG-3'的 - 构象异构体计算的瞬态光谱特性相匹配,该构象异构体的特征是具有最低的基态能量,并且与B型双链体中遇到的不同。