School of Chemistry, Cantock's University of Bristol, Bristol, BS8 1TS, UK.
Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK.
Phys Chem Chem Phys. 2019 Jul 14;21(26):14407-14417. doi: 10.1039/c8cp07864e. Epub 2019 Mar 14.
An understanding of the initial photoexcited states of DNA is essential to unravelling deleterious photoinduced chemical reactions and the intrinsic ultrafast photoprotection of the genetic code for all life. In our combined experimental and theoretical study, we have elucidated the primary non-radiative relaxation dynamics of a model nucleotide of guanine and thymine (2'-deoxyguanosine 3'-monophosphate 5'-thymidine, d(GpT)) in buffered aqueous solution. Experimentally, we unequivocally demonstrate that the Franck-Condon excited states of d(GpT) are significantly delocalised across both nucleobases, and mediate d(GpT) exciplex product formation on an ultrafast (<350 fs) timescale. Theoretical studies show that the nature of the vertical excited states is very dependent on the specific geometry of the dinucleotide, and dictate the degree of delocalised, charge-transfer or localised character. Our mechanism for prompt exciplex formation involves a rapid change in electronic structure and includes a diabatic surface crossing very close to the Franck-Condon region mediating fast d(GpT) formation. Exciplexes are quickly converted back to neutral ground state molecules on a ∼10 ps timescale with a high quantum yield, ensuring the photostability of the nucleotide sequence.
了解 DNA 的初始光激发态对于揭示有害的光诱导化学反应以及所有生命遗传密码的固有超快光保护至关重要。在我们的联合实验和理论研究中,我们阐明了鸟嘌呤和胸腺嘧啶(2'-脱氧鸟苷 3'-单磷酸 5'-胸苷,d(GpT))模型核苷酸在缓冲水溶液中的主要非辐射弛豫动力学。实验上,我们明确证明 d(GpT) 的 Franck-Condon 激发态在两个核碱基上明显离域,并在超快(<350 fs)时间尺度上介导 d(GpT) 激基复合物产物的形成。理论研究表明,垂直激发态的性质非常依赖于二核苷酸的特定几何形状,并决定了离域、电荷转移或局域特征的程度。我们的快速形成激基复合物的机制涉及电子结构的快速变化,包括在 Franck-Condon 区域附近的非绝热表面交叉,介导快速的 d(GpT) 形成。激基复合物在约 10 ps 的时间尺度上迅速转化回中性基态分子,量子产率高,确保核苷酸序列的光稳定性。