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通过合理设计π堆积肽构筑基元构建多样的拟肽框架。

Diverse Proteomimetic Frameworks via Rational Design of π-Stacking Peptide Tectons.

机构信息

Department of Chemistry, University of Illinois Chicago, Chicago, Illinois 60607, United States.

出版信息

J Am Chem Soc. 2024 Aug 14;146(32):22236-22246. doi: 10.1021/jacs.4c03094. Epub 2024 Aug 3.

DOI:10.1021/jacs.4c03094
PMID:39096501
Abstract

Peptide-based frameworks aim to integrate protein architecture into solid-state materials using simpler building blocks. Despite the growing number of peptide frameworks, there are few strategies to rationally engineer essential properties like pore size and shape. Designing peptide assemblies is generally hindered by the difficulty of predicting complex networks of weak intermolecular interactions. Peptides conjugated to polyaromatic groups are a unique case where assembly appears to be strongly driven by π-π interactions, suggesting that rationally adjusting the geometry of the π-stackers could create novel structures. Here, we report peptide elongation as a simple mechanism to predictably tune the angle between the π-stacking groups to produce a remarkable diversity of pore shapes and sizes, including some that are mesoporous. Notably, rapid jumps in pore size and shape can occur with just a single amino acid insertion. The geometry of the π-stacking residues also significantly influences framework structure, representing an additional dimension for tuning. Lastly, sequence identity can also indirectly modulate the π-π interactions. By correlating each of these factors with detailed crystallographic data, we find that, despite the complexity of peptide structure, the shape and polarity of the tectons are straightforward predictors of framework structure. These guidelines are expected to accelerate the development of advanced porous materials with protein-like capabilities.

摘要

基于肽的框架旨在使用更简单的构建块将蛋白质结构整合到固态材料中。尽管肽框架的数量不断增加,但很少有策略可以合理地设计关键性质,如孔径和形状。设计肽组装通常受到预测复杂的弱分子间相互作用网络的困难的阻碍。与多环芳烃基团共轭的肽是一个独特的案例,其中组装似乎是由π-π 相互作用强烈驱动的,这表明通过合理调整 π-堆积者的几何形状可以创造新的结构。在这里,我们报告肽伸长作为一种简单的机制,可以可预测地调节π-堆叠基团之间的角度,从而产生显著多样的孔径和形状,包括一些中孔。值得注意的是,仅插入一个氨基酸就会导致孔径和形状的快速跳跃。π-堆叠残基的几何形状也会显著影响框架结构,代表了另一个调谐维度。最后,序列同一性也可以间接调节 π-π 相互作用。通过将这些因素中的每一个与详细的晶体学数据相关联,我们发现,尽管肽结构很复杂,但 tectons 的形状和极性是框架结构的直接预测因子。这些准则有望加速具有类似蛋白质功能的先进多孔材料的发展。

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