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应用机器学习的儿科和先天性心脏病个体化医学的新兴分析方法。

Emerging Analytical Approaches for Personalized Medicine Using Machine Learning In Pediatric and Congenital Heart Disease.

机构信息

The Blalock-Taussig-Thomas Pediatric and Congenital Heart Center, Department of Pediatrics, Johns Hopkins School of Medicine, Johns Hopkins University, Baltimore, Maryland, USA.

The Blalock-Taussig-Thomas Pediatric and Congenital Heart Center, Department of Pediatrics, Johns Hopkins School of Medicine, Johns Hopkins University, Baltimore, Maryland, USA; Research Institute, SickKids Hospital, Department of Pediatrics, University of Toronto, Toronto, Ontario, Canada.

出版信息

Can J Cardiol. 2024 Oct;40(10):1880-1896. doi: 10.1016/j.cjca.2024.07.026. Epub 2024 Aug 7.

DOI:10.1016/j.cjca.2024.07.026
PMID:39097187
Abstract

Precision and personalized medicine, the process by which patient management is tailored to individual circumstances, are now terms that are familiar to cardiologists, despite it still being an emerging field. Although precision medicine relies most often on the underlying biology and pathophysiology of a patient's condition, personalized medicine relies on digital biomarkers generated through algorithms. Given the complexity of the underlying data, these digital biomarkers are most often generated through machine-learning algorithms. There are a number of analytic considerations regarding the creation of digital biomarkers that are discussed in this review, including data preprocessing, time dependency and gating, dimensionality reduction, and novel methods, both in the realm of supervised and unsupervised machine learning. Some of these considerations, such as sample size requirements and measurements of model performance, are particularly challenging in small and heterogeneous populations with rare outcomes such as children with congenital heart disease. Finally, we review analytic considerations for the deployment of digital biomarkers in clinical settings, including the emerging field of clinical artificial intelligence (AI) operations, computational needs for deployment, efforts to increase the explainability of AI, algorithmic drift, and the needs for distributed surveillance and federated learning. We conclude this review by discussing a recent simulation study that shows that, despite these analytic challenges and complications, the use of digital biomarkers in managing clinical care might have substantial benefits regarding individual patient outcomes.

摘要

精准医学和个性化医学,即根据个体情况调整患者管理的过程,尽管仍处于新兴领域,但现在已经为心脏病专家所熟悉。虽然精准医学最常依赖于患者病情的潜在生物学和病理生理学,但个性化医学依赖于通过算法生成的数字生物标志物。鉴于基础数据的复杂性,这些数字生物标志物通常通过机器学习算法生成。本文综述了在创建数字生物标志物时需要考虑的一些分析问题,包括数据预处理、时间依赖性和门控、降维以及监督和无监督机器学习领域的新方法。在儿童先天性心脏病等罕见结局的小而异质人群中,其中一些考虑因素,如样本量要求和模型性能的衡量,特别具有挑战性。最后,我们回顾了在临床环境中部署数字生物标志物的分析考虑因素,包括临床人工智能(AI)运营的新兴领域、部署的计算需求、提高 AI 可解释性的努力、算法漂移以及分布式监测和联邦学习的需求。我们通过讨论最近的一项模拟研究来结束本文,该研究表明,尽管存在这些分析挑战和复杂性,但在管理临床护理中使用数字生物标志物可能会对个体患者的预后产生重大益处。

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