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电生理网络中的振荡现象:细胞生物电与转录的耦合。

Oscillatory phenomena in electrophysiological networks: The coupling between cell bioelectricity and transcription.

机构信息

Dept. Termodinàmica, Facultat de Física, Universitat de València, 46100, Burjassot, Spain.

Dept. Termodinàmica, Facultat de Física, Universitat de València, 46100, Burjassot, Spain.

出版信息

Comput Biol Med. 2024 Sep;180:108964. doi: 10.1016/j.compbiomed.2024.108964. Epub 2024 Aug 5.

Abstract

Morphogenetic regulation during embryogenesis and regeneration rely on information transfer and coordination between different regions. Here, we explore theoretically the coupling between bioelectrical and transcriptional oscillations at the individual cell and multicellular levels. The simulations, based on a set of ion channels and intercellular gap junctions, show that bioelectrical and transcriptional waves can electrophysiologically couple distant regions of a model network in phase and antiphase oscillatory states that include synchronization phenomena. In this way, different multicellular regionalizations can be encoded by cell potentials that oscillate between depolarized and polarized states, thus allowing a spatio-temporal coding. Because the electric potential patterns characteristic of development and regeneration are correlated with the spatial distributions of signaling ions and molecules, bioelectricity can act as a template for slow biochemical signals following a hierarchy of experimental times. In particular, bioelectrical gradients that couple cell potentials to transcription rates give to each single cell a rough idea of its location in the multicellular ensemble, thus controlling local differentiation processes that switch on and off crucial parts of the genome.

摘要

胚胎发生和再生过程中的形态发生调控依赖于不同区域之间的信息传递和协调。在这里,我们从理论上探讨了单个细胞和多细胞水平上生物电和转录振荡之间的耦合。基于一组离子通道和细胞间缝隙连接的模拟表明,生物电和转录波可以在包括同步现象的相位和反相振荡状态下电生理地偶联模型网络的远程区域。通过这种方式,不同的多细胞区域化可以通过在去极化和极化状态之间振荡的细胞电位来编码,从而允许时空编码。由于与发育和再生相关的电势模式与信号离子和分子的空间分布相关,因此生物电可以作为遵循实验时间层次结构的缓慢生化信号的模板。特别是,将细胞电位与转录速率耦合的生物电梯度赋予每个单个细胞关于其在多细胞组合中的位置的大致概念,从而控制局部分化过程,这些过程开启和关闭基因组的关键部分。

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