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计算机模拟预测的具有蓝光光谱偏移的小鼠黑视蛋白可实现高效的亚细胞信号传导。

In-silico predicted mouse melanopsins with blue spectral shifts deliver efficient subcellular signaling.

作者信息

Wijayaratna Dhanushan, Sacchetta Filippo, Pedraza-González Laura, Fanelli Francesca, Sugihara Tomohiro, Koyanagi Mitsumasa, Piyawardana Senuri, Ghotra Kiran, Thotamune Waruna, Terakita Akihisa, Olivucci Massimo, Karunarathne Ajith

机构信息

Department of Chemistry, Saint Louis University, Saint Louis, MO, 63103, USA.

Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Siena, Italy.

出版信息

Cell Commun Signal. 2024 Aug 8;22(1):394. doi: 10.1186/s12964-024-01753-0.

Abstract

Melanopsin is a photopigment belonging to the G Protein-Coupled Receptor (GPCR) family expressed in a subset of intrinsically photosensitive retinal ganglion cells (ipRGCs) and responsible for a variety of processes. The bistability and, thus, the possibility to function under low retinal availability would make melanopsin a powerful optogenetic tool. Here, we aim to utilize mouse melanopsin to trigger macrophage migration by its subcellular optical activation with localized blue light, while simultaneously imaging the migration with red light. To reduce melanopsin's red light sensitivity, we employ a combination of in silico structure prediction and automated quantum mechanics/molecular mechanics modeling to predict minimally invasive mutations to shift its absorption spectrum towards the shorter wavelength region of the visible spectrum without compromising the signaling efficiency. The results demonstrate that it is possible to achieve melanopsin mutants that resist red light-induced activation but are activated by blue light and display properties indicating preserved bistability. Using the A333T mutant, we show that the blue light-induced subcellular melanopsin activation triggers localized PIP3 generation and macrophage migration, which we imaged using red light, demonstrating the optogenetic utility of minimally engineered melanopsins.

摘要

黑视蛋白是一种属于G蛋白偶联受体(GPCR)家族的光色素,在一部分内在光敏性视网膜神经节细胞(ipRGCs)中表达,并参与多种生理过程。黑视蛋白的双稳态特性,以及因此在低视网膜光照条件下发挥作用的可能性,使其成为一种强大的光遗传学工具。在这里,我们旨在利用小鼠黑视蛋白,通过局部蓝光对其进行亚细胞光学激活来触发巨噬细胞迁移,同时用红光对迁移过程进行成像。为了降低黑视蛋白对红光的敏感性,我们采用了计算机模拟结构预测和自动量子力学/分子力学建模相结合的方法,预测微创突变,以将其吸收光谱向可见光谱的较短波长区域移动,同时不影响信号传导效率。结果表明,有可能获得抗红光诱导激活但能被蓝光激活且显示出保留双稳态特性的黑视蛋白突变体。使用A333T突变体,我们表明蓝光诱导的亚细胞黑视蛋白激活触发了局部磷脂酰肌醇-3,4,5-三磷酸(PIP3)的生成和巨噬细胞迁移,我们用红光对其进行了成像,证明了经过最小化改造的黑视蛋白的光遗传学效用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/529c/11312219/474b557f3293/12964_2024_1753_Fig1_HTML.jpg

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