Sugimoto Teppei, Katayama Kota, Kandori Hideki
Department of Life Science and Applied Chemistry, Nagoya Institute of Technology, Nagoya, Japan.
Department of Life Science and Applied Chemistry, Nagoya Institute of Technology, Nagoya, Japan; OptoBioTechnology Research Center, Nagoya Institute of Technology, Nagoya, Japan.
Biophys J. 2024 Dec 17;123(24):4245-4255. doi: 10.1016/j.bpj.2024.08.005. Epub 2024 Aug 8.
Proton transfer reactions play important functional roles in many proteins, such as enzymes and transporters, which is also the case in rhodopsins. In fact, functional expression of rhodopsins accompanies intramolecular proton transfer reactions in many cases. One of the exceptional cases can be seen in the protonated form of marine bacterial TAT rhodopsin, which isomerizes the retinal by light but returns to the original state within 10 s. Thus, light energy is converted into heat without any function. In contrast, the T82D mutant of TAT rhodopsin conducts the light-induced deprotonation of the Schiff base at high pH. In this article, we report the structural analysis of T82D by means of difference Fourier transform infrared (FTIR) spectroscopy. In the light-induced difference FTIR spectra at 77 K, we observed little hydrogen out-of-plane vibrations for T82D as well as the wild-type (WT), suggesting that the planar chromophore structure itself is not the origin of the reversion from the K intermediate in WT TAT rhodopsin. Upon relaxation of the K intermediate, T82D forms the following intermediate, such as M, whereas K of WT returns to the original state. Present FTIR analysis revealed the proton transfer from the Schiff base to D82 in T82D upon formation of the M intermediate. It is accompanied by the second proton transfer from E54 to the Schiff base, forming the N intermediate, particularly in membranes. The equilibrium between the M and N intermediates corresponds to the protonation equilibrium between E54 and the Schiff base. We also found that Ca binding takes place in T82D as well as WT but with 6 times lower affinity. An altered hydrogen-bonding network would be the origin of low affinity in T82D, where deprotonation of E54 is involved in the Ca binding.
质子转移反应在许多蛋白质中发挥着重要的功能作用,如酶和转运蛋白,视紫红质也是如此。事实上,视紫红质的功能表达在许多情况下伴随着分子内质子转移反应。一个特殊的例子是海洋细菌TAT视紫红质的质子化形式,它能通过光使视黄醛异构化,但在10秒内会恢复到原始状态。因此,光能被转化为热能而没有任何功能。相比之下,TAT视紫红质的T82D突变体在高pH值下会进行光诱导的席夫碱去质子化。在本文中,我们通过差示傅里叶变换红外(FTIR)光谱法报告了T82D的结构分析。在77K下的光诱导差示FTIR光谱中,我们观察到T82D以及野生型(WT)几乎没有氢的面外振动,这表明平面发色团结构本身不是WT TAT视紫红质中从K中间体恢复的起源。在K中间体弛豫时,T82D形成以下中间体,如M,而WT的K则恢复到原始状态。目前的FTIR分析揭示了在形成M中间体时,T82D中席夫碱向D82的质子转移。它伴随着第二个质子从E54转移到席夫碱,形成N中间体,特别是在膜中。M和N中间体之间的平衡对应于E54和席夫碱之间的质子化平衡。我们还发现T82D和WT中都会发生钙结合,但亲和力低6倍。氢键网络的改变将是T82D中低亲和力的起源,其中E54的去质子化参与了钙结合。