School of Life Sciences, Shandong Province Key Laboratory of Applied Mycology, and Qingdao International Center on Microbes Utilizing Biogas, Qingdao Agricultural University, Qingdao 266109, Shandong Province, People's Republic of China.
School of Life Sciences, Shandong Province Key Laboratory of Applied Mycology, and Qingdao International Center on Microbes Utilizing Biogas, Qingdao Agricultural University, Qingdao 266109, Shandong Province, People's Republic of China.
Biotechnol Adv. 2024 Nov;76:108420. doi: 10.1016/j.biotechadv.2024.108420. Epub 2024 Aug 9.
Microorganisms co-exist and co-evolve in nature, forming intricate ecological communities. The interspecies cross-talk within these communities creates and sustains their great biosynthetic potential, making them an important source of natural medicines and high-value-added chemicals. However, conventional investigations into microbial metabolites are typically carried out in pure cultures, resulting in the absence of specific activating factors and consequently causing a substantial number of biosynthetic gene clusters to remain silent. This, in turn, hampers the in-depth exploration of microbial biosynthetic potential and frequently presents researchers with the challenge of rediscovering compounds. In response to this challenge, the coculture strategy has emerged to explore microbial biosynthetic capabilities and has shed light on the study of cross-talk mechanisms. These elucidated mechanisms will contribute to a better understanding of complex biosynthetic regulations and offer valuable insights to guide the mining of secondary metabolites. This review summarizes the research advances in microbial cross-talk mechanisms, with a particular focus on the mechanisms that activate the biosynthesis of secondary metabolites. Additionally, the instructive value of these mechanisms for developing strategies to activate biosynthetic pathways is discussed. Moreover, challenges and recommendations for conducting in-depth studies on the cross-talk mechanisms are presented.
微生物在自然界中共存和共同进化,形成复杂的生态群落。这些群落中的种间交流创造并维持了它们巨大的生物合成潜力,使它们成为天然药物和高附加值化学品的重要来源。然而,传统的微生物代谢产物研究通常在纯培养物中进行,导致缺乏特定的激活因子,从而导致大量生物合成基因簇保持沉默。这反过来又阻碍了对微生物生物合成潜力的深入探索,并经常使研究人员面临重新发现化合物的挑战。为了应对这一挑战,共培养策略被提出用于探索微生物的生物合成能力,并揭示了种间交流机制的研究。这些阐明的机制将有助于更好地理解复杂的生物合成调控,并为指导次生代谢产物的挖掘提供有价值的见解。本文综述了微生物种间交流机制的研究进展,特别关注了激活次生代谢物生物合成的机制。此外,还讨论了这些机制对开发激活生物合成途径的策略的指导价值。还提出了对深入研究种间交流机制的挑战和建议。