Suppr超能文献

分析细菌膜泡表面成分的方法。

Methods to Analyze the Surface Composition of Bacterial Membrane Vesicles.

机构信息

Department of Chemical and Biomolecular Engineering, Lehigh University, Bethlehem, PA, USA.

出版信息

Methods Mol Biol. 2024;2843:3-14. doi: 10.1007/978-1-0716-4055-5_1.

Abstract

Bacterial membrane vesicles (BMVs) are small, spherical structures released by Gram-positive and Gram-negative bacteria that play essential roles in intercellular communication, nutrient acquisition, and antibiotic resistance. BMVs typically range from 40 to 400 nm in diameter and contain a single membrane derived from the bacterial membrane, comprising proteins, lipids, nucleic acids, and other biomolecules. Notably, the molecules located on the surface of BMVs facilitate interactions with neighboring cells, including the transfer of functional genes, coordination of bacterial growth through quorum sensing, and delivery of toxins during infections. In addition, BMVs exhibit heterogeneity in their surface composition, which influences their interactions with host and bacterial cells. It is therefore essential to understand not just the composition of BMVs, but the localization of the molecules of interest, particularly those on the surface. In this chapter, we describe several methods that can be used to quantify and characterize the protein and nucleic acid composition, particularly on the surface of BMVs. We describe quantitative immunoblot and ELISA protocols that enable quantification of the concentration of a particular protein of interest. We also describe an enzymatic digestion protocol to determine whether the protein of interest is located on the surface or within the lumen of the BMV, as well as a nucleic acid staining procedure that enables quantification of dsDNA specifically located on the surface of the BMVs. Together, these tools provide a detailed analysis of the protein and nucleic acid composition of BMVs that can be further combined with various separation techniques to study variations within different populations.

摘要

细菌膜泡(BMVs)是由革兰氏阳性和革兰氏阴性细菌释放的小的、球形结构,在细胞间通讯、营养物质获取和抗生素耐药性方面发挥着重要作用。BMVs 的直径通常在 40 到 400nm 之间,包含一个源自细菌膜的单一膜,其中包含蛋白质、脂质、核酸和其他生物分子。值得注意的是,BMVs 表面的分子有助于与相邻细胞相互作用,包括功能基因的转移、通过群体感应协调细菌生长以及在感染过程中输送毒素。此外,BMVs 表面组成的异质性影响它们与宿主和细菌细胞的相互作用。因此,了解 BMVs 的组成,以及感兴趣的分子的定位,特别是表面上的分子定位,是至关重要的。在本章中,我们描述了几种可用于定量和表征蛋白质和核酸组成的方法,特别是 BMVs 表面的组成。我们描述了定量免疫印迹和 ELISA 方案,可用于定量特定感兴趣蛋白的浓度。我们还描述了一种酶消化方案,以确定感兴趣的蛋白是位于 BMV 的表面还是内腔中,以及一种核酸染色程序,可用于定量特定位于 BMV 表面的 dsDNA。这些工具共同提供了对 BMV 蛋白质和核酸组成的详细分析,可以与各种分离技术进一步结合,以研究不同群体中存在的差异。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验