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基于M2肿瘤相关巨噬细胞和血管生成相关基因对单细胞RNA和批量RNA测序进行综合分析,以评估肺腺癌的预后和治疗反应。

Comprehensive analysis of single-cell RNA and bulk RNA sequencing based on M2 tumor-associated macrophage and angiogenesis-related genes to assess prognosis and therapeutic response in lung adenocarcinoma.

作者信息

Liu Anbang, Liu Gengqiu, Wang Xiaohuai, Yan Dongqing, Zhang Junhang, Wei Li

机构信息

Department of Thoracic Surgery, Qingdao Municipal Hospital, 266000, Qingdao, Shandong, China.

Department of Thoracic Surgery, The Seventh Affiliated Hospital, Sun Yat-sen University, No. 628, Zhenyuan Road, Guangming Dist., Shenzhen, 518107, China.

出版信息

Heliyon. 2024 Jul 17;10(14):e34784. doi: 10.1016/j.heliyon.2024.e34784. eCollection 2024 Jul 30.

Abstract

M2 tumor-associated macrophage (M2 TAM), a crucial component of the tumor microenvironment, has a significant impact on tumor invasion and metastasis in the form of angiogenesis for lung adenocarcinoma (LUAD). In this study, both single-cell RNA and bulk RNA sequencing data were analyzed to identify 12 M2 TAM and angiogenesis-related genes (OLR1, CTSL, HLA-DPB1, NUPR1, ALOX5, DOCK4, CSF2RB, PTPN6, TNFSF12, HNRNPA2B1, NCL, and BIRC2). These genes were used to construct a prognostic signature, which was subsequently validated using an external cohort. Moreover, the immune profile analysis indicated that the low-risk group exhibited a distinct immune cell infiltration and relatively active status. Importantly, the prognostic signature was closely associated with PD-1, CTLA4, tumor mutation burden, and anti-cancer drug sensitivity. In summary, this study proposes a new prognostic signature for patients with LUAD based on M2 TAM and angiogenesis-related genes. The signature forecasts the prognosis of LUAD by an independent manner, reveals the potential molecular mechanisms involved in tumor immune-related functions, and offers appropriate clinical strategies for the treatment of patients with LUAD.

摘要

M2肿瘤相关巨噬细胞(M2 TAM)是肿瘤微环境的关键组成部分,以血管生成的形式对肺腺癌(LUAD)的肿瘤侵袭和转移产生重大影响。在本研究中,对单细胞RNA和批量RNA测序数据进行了分析,以鉴定12个与M2 TAM和血管生成相关的基因(OLR1、CTSL、HLA-DPB1、NUPR1、ALOX5、DOCK4、CSF2RB、PTPN6、TNFSF12、HNRNPA2B1、NCL和BIRC2)。这些基因用于构建预后特征,随后使用外部队列进行验证。此外,免疫谱分析表明,低风险组表现出明显的免疫细胞浸润和相对活跃的状态。重要的是,预后特征与PD-1、CTLA4、肿瘤突变负荷和抗癌药物敏感性密切相关。总之,本研究基于M2 TAM和血管生成相关基因提出了一种新的LUAD患者预后特征。该特征以独立的方式预测LUAD的预后,揭示了肿瘤免疫相关功能中潜在的分子机制,并为LUAD患者的治疗提供了适当的临床策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/935c/11325380/39dd8ffc77f5/gr1.jpg

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