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细胞周期蛋白D1在异位骨化中的双重作用:塞来昔布治疗的非经典途径

The dual role of CCND1 in heterotopic ossification: A Non-canonical Pathway for Celecoxib treatment.

作者信息

Liu Wei, Huang Junchao, Hu Jianhai, Bu Ziheng, Zhou Zheng, Yu Jianing, Wang Huajun, Wu Xinbo, Wu Peng

机构信息

Department of Orthopedics, Shanghai Tenth People's Hospital, School of Medicine, Tongji University, Shanghai, 200072, China.

Department of Sports Medicine, The First Affiliated Hospital, Guangdong Provincial Key Laboratory of Speed Capability, The Guangzhou Key Laboratory of Precision Orthopedics and Regenerative Medicine, State Key Laboratory of Frigid Zone Cardiovascular Diseases, Jinan University, Guangzhou, 510630, China.

出版信息

Heliyon. 2024 Jul 20;10(15):e34936. doi: 10.1016/j.heliyon.2024.e34936. eCollection 2024 Aug 15.

Abstract

OBJECTIVE

To explore the effective targets of Celecoxib in the treatment of heterotopic ossification using network pharmacology methods.

METHODS

Potential molecules related to heterotopic ossification were obtained by retrieving the GEO and CTD databases and intersecting them. Potential binding targets of Celecoxib were acquired from the STITCH database. A protein-protein interaction network was constructed between potential binding targets of Celecoxib and potential related molecules of heterotopic ossification using the STRING database. Molecules in the protein-protein interaction network were further analyzed using GO and KEGG enrichment analysis in R software, followed by enrichment analysis of active molecules in the Celecoxib-heterotopic ossification target dataset. Hub genes were selected based on the "degree" value and enrichment within the protein-protein interaction network. The binding affinity of hub genes to Celecoxib was observed using molecular docking techniques. Finally, in vitro experiments were conducted to validate the effectiveness of hub genes and explore their regulatory role in the progression of heterotopic ossification. Additionally, the therapeutic effect of Celecoxib, which modulates the expression of the hub genes, was investigated in the treatment of heterotopic ossification.

RESULTS

568 potential molecules related to heterotopic ossification and 76 potential binding targets of Celecoxib were identified. After intersection, 13 potential functional molecules in Celecoxib's treatment of heterotopic ossification were obtained. KEGG analysis suggested pathways such as Rheumatoid arthritis, NF-kappa B signaling pathway, Pathways in cancer, Antifolate resistance, MicroRNAs in cancer play a role in the treatment of heterotopic ossification by Celecoxib. Further enrichment analysis of the 13 potential functional molecules identified 5 hub genes: IL6, CCND1, PTGS2, IGFBP3, CDH1. Molecular docking results indicated that Celecoxib displayed excellent binding affinity with CCND1 among the 5 hub genes. Experimental validation found that CCND1 is highly expressed in the progression of heterotopic ossification, promoting heterotopic ossification in the early stages and inhibiting it in the later stages, with Celecoxib's treatment of heterotopic ossification depending on CCND1.

CONCLUSION

In the process of treating heterotopic ossification with Celecoxib, immune and inflammatory signaling pathways play a significant role. The therapeutic effect of Celecoxib on heterotopic ossification depends on the hub gene CCND1, which plays different roles at different stages of the progression of heterotopic ossification, ultimately inhibiting the occurrence of heterotopic ossification.

摘要

目的

采用网络药理学方法探索塞来昔布治疗异位骨化的有效靶点。

方法

通过检索GEO和CTD数据库并进行交集分析,获取与异位骨化相关的潜在分子。从STITCH数据库中获取塞来昔布的潜在结合靶点。利用STRING数据库构建塞来昔布潜在结合靶点与异位骨化潜在相关分子之间的蛋白质-蛋白质相互作用网络。使用R软件对蛋白质-蛋白质相互作用网络中的分子进行GO和KEGG富集分析,随后对塞来昔布-异位骨化靶点数据集中的活性分子进行富集分析。根据“度”值和蛋白质-蛋白质相互作用网络内的富集情况选择枢纽基因。使用分子对接技术观察枢纽基因与塞来昔布的结合亲和力。最后,进行体外实验验证枢纽基因的有效性,并探索其在异位骨化进展中的调控作用。此外,研究了调节枢纽基因表达的塞来昔布在治疗异位骨化中的疗效。

结果

鉴定出568个与异位骨化相关的潜在分子和76个塞来昔布的潜在结合靶点。交集后,获得了13个塞来昔布治疗异位骨化的潜在功能分子。KEGG分析表明,类风湿关节炎、NF-κB信号通路、癌症通路、抗叶酸耐药、癌症中的微小RNA等通路在塞来昔布治疗异位骨化中发挥作用。对这13个潜在功能分子的进一步富集分析确定了5个枢纽基因:IL6、CCND1、PTGS2、IGFBP3、CDH1。分子对接结果表明,在5个枢纽基因中,塞来昔布与CCND1表现出优异的结合亲和力。实验验证发现,CCND1在异位骨化进展中高表达,在早期促进异位骨化,在后期抑制异位骨化,塞来昔布治疗异位骨化依赖于CCND1。

结论

在塞来昔布治疗异位骨化的过程中,免疫和炎症信号通路发挥重要作用。塞来昔布对异位骨化的治疗效果依赖于枢纽基因CCND1,CCND1在异位骨化进展的不同阶段发挥不同作用,最终抑制异位骨化的发生。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/627b/11327559/9041d675f8db/gr1.jpg

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