Laboratory of Genome Dynamics, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague 4142 20, Czech Republic.
Faculty of Science, Charles University in Prague, Prague 2128 43, Czech Republic.
Nucleic Acids Res. 2024 Oct 14;52(18):10986-10998. doi: 10.1093/nar/gkae708.
In response to DNA damage, the histone PARylation factor 1 (HPF1) regulates PARP1/2 activity, facilitating serine ADP-ribosylation of chromatin-associated factors. While PARP1/2 are known for their role in DNA single-strand break repair (SSBR), the significance of HPF1 in this process remains unclear. Here, we investigated the impact of HPF1 deficiency on cellular survival and SSBR following exposure to various genotoxins. We found that HPF1 loss did not generally increase cellular sensitivity to agents that typically induce DNA single-strand breaks (SSBs) repaired by PARP1. SSBR kinetics in HPF1-deficient cells were largely unaffected, though its absence partially influenced the accumulation of SSB intermediates after exposure to specific genotoxins in certain cell lines, likely due to altered ADP-ribosylation of chromatin. Despite reduced serine mono-ADP-ribosylation, HPF1-deficient cells maintained robust poly-ADP-ribosylation at SSB sites, possibly reflecting PARP1 auto-poly-ADP-ribosylation at non-serine residues. Notably, poly-ADP-ribose chains were sufficient to recruit the DNA repair factor XRCC1, which may explain the relatively normal SSBR capacity in HPF1-deficient cells. These findings suggest that HPF1 and histone serine ADP-ribosylation are largely dispensable for PARP1-dependent SSBR in response to genotoxic stress, highlighting the complexity of mechanisms that maintain genomic stability and chromatin remodeling.
针对 DNA 损伤,组蛋白 PAR 化因子 1(HPF1)调节 PARP1/2 的活性,促进染色质相关因子的丝氨酸 ADP-核糖基化。虽然 PARP1/2 以其在 DNA 单链断裂修复(SSBR)中的作用而闻名,但 HPF1 在该过程中的意义尚不清楚。在这里,我们研究了 HPF1 缺失对各种遗传毒物暴露后细胞存活和 SSBR 的影响。我们发现,HPF1 缺失通常不会增加细胞对通常诱导由 PARP1 修复的 DNA 单链断裂(SSBs)的药物的敏感性。HPF1 缺陷细胞的 SSBR 动力学基本不受影响,尽管其缺失在某些细胞系中暴露于特定遗传毒物后会部分影响 SSB 中间产物的积累,这可能是由于染色质 ADP-核糖基化的改变。尽管丝氨酸单 ADP-核糖基化减少,但 HPF1 缺陷细胞仍能在 SSB 部位保持强大的聚 ADP-核糖基化,这可能反映了 PARP1 在非丝氨酸残基上的自身聚 ADP-核糖基化。值得注意的是,聚 ADP-核糖链足以募集 DNA 修复因子 XRCC1,这可以解释 HPF1 缺陷细胞相对正常的 SSBR 能力。这些发现表明,HPF1 和组蛋白丝氨酸 ADP-核糖基化在遗传毒物应激下 PARP1 依赖性 SSBR 中基本是可有可无的,突出了维持基因组稳定性和染色质重塑的机制的复杂性。
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