Koh Jiwon, Kim Jinyong, Woo Go-Un, Yi Hanbaek, Kwon So Yean, Seo Jeongmin, Bae Jeong Mo, Kim Jung Ho, Won Jae Kyung, Ryu Han Suk, Jeon Yoon Kyung, Lee Dae-Won, Kim Miso, Kim Tae-Yong, Lee Kyung-Hun, Kim Tae-You, Lee Jee-Soo, Seong Moon-Woo, Kim Sheehyun, Lee Sungyoung, Yun Hongseok, Song Myung Geun, Choi Jaeyong, Kim Jong-Il, Im Seock-Ah
Department of Pathology, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Korea.
Cancer Research Institute, Seoul National University, Seoul, Korea.
Cancer Res Treat. 2025 Apr;57(2):443-456. doi: 10.4143/crt.2024.296. Epub 2024 Aug 21.
PURPOSE: Considering the high disease burden and unique features of Asian patients with breast cancer (BC), it is essential to have a comprehensive view of genetic characteristics in this population. An institutional targeted sequencing platform was developed through the Korea Research-Driven Hospitals project and was incorporated into clinical practice. This study explores the use of targeted next-generation sequencing (NGS) and its outcomes in patients with advanced/metastatic BC in the real world. MATERIALS AND METHODS: We reviewed the results of NGS tests administered to BC patients using a customized sequencing platform-FiRST Cancer Panel (FCP)-over 7 years. We systematically described clinical translation of FCP for precise diagnostics, personalized therapeutic strategies, and unraveling disease pathogenesis. RESULTS: NGS tests were conducted on 548 samples from 522 patients with BC. Ninety-seven point six percentage of tested samples harbored at least one pathogenic alteration. The common alterations included mutations in TP53 (56.2%), PIK3CA (31.2%), GATA3 (13.8%), BRCA2 (10.2%), and amplifications of CCND1 (10.8%), FGF19 (10.0%), and ERBB2 (9.5%). NGS analysis of ERBB2 amplification correlated well with human epidermal growth factor receptor 2 immunohistochemistry and in situ hybridization. RNA panel analyses found potentially actionable and prognostic fusion genes. FCP effectively screened for potentially germline pathogenic/likely pathogenic mutation. Ten point three percent of BC patients received matched therapy guided by NGS, resulting in a significant overall survival advantage (p=0.022), especially for metastatic BCs. CONCLUSION: Clinical NGS provided multifaceted benefits, deepening our understanding of the disease, improving diagnostic precision, and paving the way for targeted therapies. The concrete advantages of FCP highlight the importance of multi-gene testing for BC, especially for metastatic conditions.
目的:鉴于亚洲乳腺癌(BC)患者的高疾病负担和独特特征,全面了解该人群的基因特征至关重要。通过韩国研究驱动医院项目开发了一个机构性靶向测序平台,并将其纳入临床实践。本研究探讨了在现实世界中晚期/转移性BC患者中靶向新一代测序(NGS)的应用及其结果。 材料与方法:我们回顾了使用定制测序平台——FiRST癌症检测板(FCP)对BC患者进行的7年以上NGS检测结果。我们系统地描述了FCP在精确诊断、个性化治疗策略和揭示疾病发病机制方面的临床转化。 结果:对522例BC患者的548个样本进行了NGS检测。97.6%的检测样本至少有一处致病性改变。常见改变包括TP53(56.2%)、PIK3CA(31.2%)、GATA3(13.8%)、BRCA2(10.2%)的突变,以及CCND1(10.8%)、FGF19(10.0%)和ERBB2(9.5%)的扩增。ERBB2扩增的NGS分析与人类表皮生长因子受体2免疫组织化学和原位杂交相关性良好。RNA检测板分析发现了潜在可操作和具有预后意义的融合基因。FCP有效地筛查了潜在的种系致病性/可能致病性突变。10.3%的BC患者接受了由NGS指导的匹配治疗,从而获得了显著的总生存优势(p=0.022),尤其是对于转移性BC患者。 结论:临床NGS提供了多方面的益处,加深了我们对疾病的理解,提高了诊断精度,并为靶向治疗铺平了道路。FCP的具体优势突出了BC多基因检测的重要性,尤其是对于转移性疾病。
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