Lv Yinchun, Chen Yulin, Li Xue, Li Siying, Huang Qiaorong, Lu Ran, Ye Junman, Meng Wentong, Chen Xiaolong, Mo Xianming
Department of General Surgery, Gastric Cancer Center, Laboratory of Stem Cell Biology, West China Hospital, Sichuan University, Chengdu, China.
Department of Urology and Pelvic Surgery, West China-PUMC C.C. Chen Institute of Health, West China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, China.
Heliyon. 2024 Jul 31;10(15):e35529. doi: 10.1016/j.heliyon.2024.e35529. eCollection 2024 Aug 15.
Previously we have identified that the expression number and levels of oncogenes and antioncogenes are highly positively or negatively associated with major cellular progress in a cancer cell. However, we have not defined any cellular potentials of a human tumor cell at the level of the overall gene expression. Here, we counted the overall number of expression genes and overall counts of mRNA in depth and revealed that the expression levels of mRNA were directly associated with the expression number of genes in a human tumor cell. Gene expression networks revealed steady states of tricarboxylic acid (TCA) cycle and ATP production, differentiation potentials that might be disturbed and blocked by uncertain gene expressing networks, and potential capabilities to undergo epithelial-mesenchymal transition (EMT), neurogenesis, angiogenesis, inflammatory response, immune evasion, and metastasis in a human tumor cell. Our analysis identifies unpredictable gene expression characteristics in human tumor cells. The results might profoundly influence mechanisms how a human tumor cell generates and undergoes its progresses.
此前我们已经确定,癌基因和抗癌基因的表达数量及水平与癌细胞中的主要细胞进程高度正相关或负相关。然而,我们尚未在整体基因表达水平上定义人类肿瘤细胞的任何细胞潜能。在此,我们深入计算了表达基因的总数和mRNA的总计数,并揭示了mRNA的表达水平与人类肿瘤细胞中基因的表达数量直接相关。基因表达网络揭示了三羧酸(TCA)循环和ATP产生的稳态、可能被不确定的基因表达网络干扰和阻断的分化潜能,以及人类肿瘤细胞中发生上皮-间质转化(EMT)、神经发生、血管生成、炎症反应、免疫逃避和转移的潜在能力。我们的分析确定了人类肿瘤细胞中不可预测的基因表达特征。这些结果可能会深刻影响人类肿瘤细胞产生和经历其进程的机制。