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膜联蛋白 A5 预测头颈部鳞状细胞癌的预后和免疫反应,并介导其增殖和迁移。

ANXA5 predicts prognosis and immune response and mediates proliferation and migration in head and neck squamous cell carcinoma.

机构信息

Department of Otorhinolaryngology, Gaozhou People's Hospital, Gaozhou, China.

Department of Otorhinolaryngology, Affiliated Hospital of Guangdong Medical University, Zhanjiang, China.

出版信息

Gene. 2024 Dec 30;931:148867. doi: 10.1016/j.gene.2024.148867. Epub 2024 Aug 20.

Abstract

BACKGROUND

Head and neck squamous cell carcinoma (HNSCC) is a common malignancy that often develops unnoticed. Typically, these tumors are identified at advanced stages, resulting in a relatively low chance of successful treatment. Anoikis serves as a natural defense against the spread of tumor cells, meaning circumventing anoikis can effectively inhibit tumor metastasis. Nonetheless, studies focusing on anoikis in the context of HNSCC remain scarce.

METHODS

Anoikis-related genes (ARGs) were identified by using the GeneCards and Harmonizome databases. Expression data of these genes and relevant clinical features were downloaded from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases. A LASSO regression and a prognostic risk score model were developed to determine their prognostic significance. The analysis included the use of the CIBERSORT algorithm to quantify immune and stromal cell presence. Furthermore, in vitro and in vivo, we confirmed the expression and functional roles of proteins and mRNA of genes independently predictive of prognosis.

RESULTS

The study identified eight genes linked to prognosis (ANXA5, BAK1, CDKN2A, PPARG, CCR7, MAPK11, CRYAB, CRYBA1) and developed a prognostic model that effectively forecasts the survival outcomes for patients with HNSCC. A higher survival likelihood is associated with lower risk scores. In addition, a significant relationship was found between immune and risk score, and ANXA5 deletion promoted the killing of HNSCC cells by activated CD8 T cells. During the screening process, 65 different chemotherapeutic drugs were found to have significant differences in IC50 values when comparing high- and low-risk categories. ANXA5 emerged as a gene with independent prognostic significance, exhibiting notably elevated protein and mRNA levels in HNSCC tissue compared to non-tumorous tissue. The suppression of ANXA5 gene activity resulted in a substantial decrease in both the growth and mobility of HNSCC cells. Animal model experiments demonstrated that inhibiting ANXA5 suppressed HNSCC growth and migration in vivo.

CONCLUSION

Through bioinformatics, a prognostic risk model of high precision was developed, offering valuable insights into the survival rates and immune responses in patients with HNSCC. ANXA5 is highlighted as a significant prognostic factor among the identified genes, indicating its promise as a potential therapeutic target for those with HNSCC.

摘要

背景

头颈部鳞状细胞癌(HNSCC)是一种常见的恶性肿瘤,通常在不知不觉中发展。这些肿瘤通常在晚期被发现,因此成功治疗的机会相对较低。失巢凋亡是阻止肿瘤细胞扩散的天然防御机制,因此规避失巢凋亡可以有效抑制肿瘤转移。然而,针对 HNSCC 中失巢凋亡的研究仍然很少。

方法

使用 GeneCards 和 Harmonizome 数据库鉴定与失巢凋亡相关的基因(ARGs)。从癌症基因组图谱(TCGA)和基因表达综合数据库(GEO)下载这些基因的表达数据和相关临床特征。使用 LASSO 回归和预后风险评分模型来确定其预后意义。该分析包括使用 CIBERSORT 算法来量化免疫和基质细胞的存在。此外,我们在体外和体内验证了独立预测预后的基因的蛋白质和 mRNA 的表达和功能作用。

结果

研究确定了与预后相关的八个基因(ANXA5、BAK1、CDKN2A、PPARG、CCR7、MAPK11、CRYAB、CRYBA1),并开发了一种能够有效预测 HNSCC 患者生存结果的预后模型。较低的风险评分与较高的生存率相关。此外,还发现免疫和风险评分之间存在显著关系,并且 ANXA5 的缺失促进了激活的 CD8+T 细胞对 HNSCC 细胞的杀伤。在筛选过程中,发现 65 种不同的化疗药物在比较高低风险类别时,IC50 值有显著差异。ANXA5 是一个具有独立预后意义的基因,与非肿瘤组织相比,HNSCC 组织中其蛋白质和 mRNA 水平显著升高。抑制 ANXA5 基因的活性导致 HNSCC 细胞的生长和迁移能力显著下降。动物模型实验表明,抑制 ANXA5 可抑制体内 HNSCC 的生长和迁移。

结论

通过生物信息学,开发了一种高精度的预后风险模型,为 HNSCC 患者的生存率和免疫反应提供了有价值的见解。ANXA5 是鉴定基因中的一个重要预后因素,表明其有望成为 HNSCC 患者的潜在治疗靶点。

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