Yoo Brian B, Yamamoto Norihisa, Quintero Justina Ilutsik, Machado Maria Jose, Sabour Sarah, Blosser Sara, Karlsson Maria, Rasheed James Kamile, Brown Allison C
Division of Healthcare Quality Promotion, National Center for Emerging Zoonotic and Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Division of Healthcare Quality Promotion, National Center for Emerging Zoonotic and Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA; Department of Infection Control and Prevention, Osaka University Graduate School of Medicine, Osaka, Japan.
J Glob Antimicrob Resist. 2024 Dec;39:54-58. doi: 10.1016/j.jgar.2024.08.004. Epub 2024 Aug 19.
Despite clinical relevance, commercially available molecular tools for accurate β-lactamase detection are limited. In this study, we evaluated the performance of the ARM-D Kit, β-Lactamase, a commercially available multiplex PCR assay designed to detect nine β-lactamase genes, including the five major plasmid-mediated carbapenemases, ESBL and AmpC genes circulating in the United States.
A diverse collection of 113 Gram-negative isolates, including 42 with multiple β-lactamases genes, was selected from the U.S. Centers for Disease Control and Prevention (CDC) & Food and Drug Administration (FDA) Antimicrobial Resistance Isolate Bank, to represent the most frequently detected bacterial species carrying plasmid-mediated β-lactam resistance genes.
Results were compared with whole genome sequence data. Of 164 β-lactamase gene targets with 49 unique variants, all were detected correctly without any cross-reactivity. The sensitivity and specificity were 100% (164/164) and 99.9% (852/853), respectively.
The ARM-D Kit, β-Lactamase detected a wide range of β-lactamase genotypes at a low upfront cost. The Streck assay represents a suitable, comprehensive tool for the detection of key β-lactamase resistance genes of public health concern in the United States.
尽管具有临床相关性,但用于准确检测β-内酰胺酶的商用分子工具有限。在本研究中,我们评估了ARM-D试剂盒β-内酰胺酶的性能,这是一种商用多重PCR检测方法,旨在检测9种β-内酰胺酶基因,包括在美国流行的5种主要质粒介导的碳青霉烯酶、超广谱β-内酰胺酶(ESBL)和AmpC基因。
从美国疾病控制与预防中心(CDC)和食品药品监督管理局(FDA)的抗菌药物耐药性分离株库中选取了113株革兰氏阴性菌分离株,包括42株携带多种β-内酰胺酶基因的菌株,以代表最常检测到的携带质粒介导的β-内酰胺耐药基因的细菌种类。
将结果与全基因组序列数据进行比较。在164个具有49种独特变体的β-内酰胺酶基因靶点中,所有靶点均被正确检测,无任何交叉反应。灵敏度和特异性分别为100%(164/164)和99.9%(852/853)。
ARM-D试剂盒β-内酰胺酶能够以较低的前期成本检测多种β-内酰胺酶基因型。Streck检测法是一种适用于检测美国公共卫生关注的关键β-内酰胺酶耐药基因的综合工具。