Bacteriology-Hygiene Unit, Assistance Publique/Hôpitaux de Paris, Bicêtre Hospital, Le Kremlin-Bicêtre, France.
EA7361 "Structure, dynamic, function and expression of broad spectrum β-lactamases," Université Paris-Sud, Université Paris-Saclay, LabEx Lermit, Faculty of Medicine, Le Kremlin-Bicêtre, France.
J Clin Microbiol. 2018 Feb 22;56(3). doi: 10.1128/JCM.01092-17. Print 2018 Mar.
As carbapenemase-producing Gram-negative bacilli (CP-GNB) (, , and spp.) are becoming a major public health issue, there is an urgent need for accurate and fast diagnostic tests. The Amplidiag CarbaR+VRE assay is a multiplex nucleic acid-based diagnostic test intended for the detection of CP-GNB and vancomycin-resistant enterococci (VRE) from cultured colonies. We have evaluated its ability to detect carbapenemase genes in 100 well-characterized GNB and in 200 consecutive enterobacterial isolates with reduced susceptibility to carbapenems that were referred to the French National Reference Center for carbapenem resistance. The assay has been validated on purified DNA but also directly on colonies. The Amplidiag CarbaR+VRE assay could detect all KPC, NDM, VIM, IMP, and OXA-48-like variants tested and all acquired carbapenem-hydrolyzing oxacillinases from (OXA-23, OXA-24/-40, and OXA-58) as well as the overexpressed chromosomally encoded OXA-51-like β-lactamase associated with an upstream inserted IS However, as claimed by the manufacturer, other carbapenemases such as GES-like carbapenemases (GES-2, GES-5, and GES-14), GIM-1, AIM-1, SPM-1, DIM-1, OXA-198 in , or OXA-143-like in were not detected. Amplidiag CarbaR+VRE's performance values were high (100% sensitivity and 99% specificity) as it could detect the five major carbapenemases-NDM, VIM, IMP, KPC, and OXA-48-as well as OXA-type carbapenemases from spp. that are currently emerging also among and other enterobacterial isolates. It can provide a result directly from colonies growing on Mueller-Hinton (MH) agar or on selective screening medium in less than 2 h. Further evaluations are now necessary to determine the performance values directly on rectal swabs.
由于产生碳青霉烯酶的革兰氏阴性杆菌(CP-GNB)(肠杆菌科,铜绿假单胞菌和不动杆菌属)正成为一个主要的公共卫生问题,因此迫切需要准确和快速的诊断测试。Amplidiag CarbaR+VRE 检测试剂盒是一种基于多重核酸的诊断检测试剂盒,用于从培养的菌落中检测 CP-GNB 和耐万古霉素肠球菌(VRE)。我们已经评估了它在 100 种明确的革兰氏阴性菌和 200 株对碳青霉烯类药物敏感性降低的肠杆菌科连续分离株中检测碳青霉烯酶基因的能力,这些分离株被送到法国国家碳青霉烯类耐药参考中心。该检测试剂盒已在纯化的 DNA 上进行了验证,但也可以直接在菌落上进行验证。Amplidiag CarbaR+VRE 检测试剂盒可以检测到所有测试的 KPC、NDM、VIM、IMP 和 OXA-48 样变体,以及所有从(OXA-23、OXA-24/-40 和 OXA-58)获得的耐碳青霉烯类水解的青霉素酶,以及与上游插入的 IS 相关的染色体编码的 OXA-51 样β-内酰胺酶。然而,正如制造商所声称的那样,其他碳青霉烯酶,如 GES 样碳青霉烯酶(GES-2、GES-5 和 GES-14)、GIM-1、AIM-1、SPM-1、DIM-1、OXA-198 在 或 OXA-143 样在 中没有被检测到。Amplidiag CarbaR+VRE 的性能值很高(100%的敏感性和 99%的特异性),因为它可以检测到 5 种主要的碳青霉烯酶-NDM、VIM、IMP、KPC 和 OXA-48-以及目前在 和其他肠杆菌科分离株中也出现的 OXA 型碳青霉烯酶。它可以直接从在 Mueller-Hinton(MH)琼脂或选择性筛选培养基上生长的菌落中在不到 2 小时内提供结果。现在需要进一步评估,以确定直接在直肠拭子上的性能值。