Rostami Nejad Mohammad, Bandarian Fatemeh, Razi Farideh, Razzaghi Zahra, Robati Reza M, Rezaei Mitra, Arjmand Babak, Rezaei-Tavirani Mostafa, Hamzeloo-Moghadam Maryam
Celiac Disease and Gluten Related Disorders Research Center, Research Institute for Gastroenterology and Liver Disease, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Endocrinology and Metabolism Research Center, Endocrinology and Metabolism Clinical Sciences Institute, Tehran University of Medical Sciences, Tehran, Iran.
J Lasers Med Sci. 2024 Aug 4;15:e33. doi: 10.34172/jlms.2024.33. eCollection 2024.
Intensity is one of the important parameters of laser radiation in photodynamic therapy. Effective treatment requires the selection of a suitable power of laser. This study aimed to evaluate laser effectiveness in photodynamic therapy via high and low intensity by the analysis of the gene expression profiles of the treated cells. The gene expression profiles of human SK-ChA-1 cells which are treated by 500mW and 50mW laser radiation were retrieved from the Gene Expression Omnibus (GEO) database. Data were assessed by the GEO2R program, and the significant differentially expressed genes (DEGs) were investigated via expression examination and protein-protein interaction (PPI) network analysis. Analyses revealed that the higher intensity of radiation is associated with wide gene expression changes relative to the lower mode. 196 significant DEGs were identified and assessed. The extremely dysregulated DEGs except MMP1 were down-regulated. STAT1, IRF7, IL1B, DDX58, ISG15, RSAD2, DHX58, OASL, OAS1, STAT2, DDX60, OAS2, USP18, and IFI44L were introduced as hubs of the main component of the PPI network. Final analysis showed that STAT1, IRF7, IL1B, DDX58, and STAT2 are the critical DEGs. Compared to the 50 mW mode of radiation, 500 mW laser intensity effectively changed apoptosis, differentiation, cell proliferation and angiogenesis, regulation of other inflammation-related molecules, innate immunity, and maintaining immune homeostasis.
强度是光动力疗法中激光辐射的重要参数之一。有效的治疗需要选择合适的激光功率。本研究旨在通过分析经处理细胞的基因表达谱,评估高强度和低强度光动力疗法中激光的有效性。从基因表达综合数据库(GEO)中检索了经500mW和50mW激光辐射处理的人SK-ChA-1细胞的基因表达谱。数据通过GEO2R程序进行评估,并通过表达检测和蛋白质-蛋白质相互作用(PPI)网络分析研究显著差异表达基因(DEG)。分析表明,相对于低强度模式,较高强度的辐射与广泛的基因表达变化相关。鉴定并评估了196个显著的DEG。除MMP1外,极度失调的DEG均下调。STAT1、IRF7、IL1B、DDX58、ISG15、RSAD2、DHX58、OASL、OAS1、STAT2、DDX60、OAS2、USP18和IFI44L被引入作为PPI网络主要成分的枢纽。最终分析表明,STAT1、IRF7、IL1B、DDX58和STAT2是关键的DEG。与50mW辐射模式相比,500mW激光强度有效地改变了细胞凋亡、分化、细胞增殖和血管生成、其他炎症相关分子的调节、先天免疫以及维持免疫稳态。