Rostami-Nejad Mohammad, Rezaei-Tavirani Mostafa, Zadeh-Esmaeel Mohammad-Mehdi, RezaeiTavirani Sina, Akbari Zahra, Esmaeili Somayeh, Okhovatian Farshad
Gastroenterology and Liver Diseases Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Proteomics Research Center, Faculty of Paramedical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
J Lasers Med Sci. 2019 Fall;10(4):257-263. doi: 10.15171/jlms.2019.42. Epub 2019 Oct 1.
Laser therapy is known as an efficient approach in dermatology surgery. CO2 laser therapy is a gold standard treatment in skin surgery. This study aimed to evaluate the interferons change after CO2 laser surgery Significant differentially-expressed genes (DEGs) of arm skin after 7 days of treatment by the CO2 laser relative to the controls are downloaded from Gene Expression Omnibus (GEO) and are included in the protein-protein interaction network via a STRING database (an application of Cytoscape software). The central DEGs were identified and enriched via gene ontology by using Clue GO software. A network including 78 DEGs and 100 neighbors was constructed and STAT1, MX1, ISG15, OAS1, IFIT1, IRF8, OASL, OAS2, and RSAD2 as hubs and STAT1, PTPRC, MX1, IRF8, ISG15, IL6, RORC, SAMSN1, and IFIT1 as bottlenecks were introduced. The cytokine-mediated signaling pathway, interferon gamma signaling, hepatitis C, interferon alpha/beta signaling, and the type I interferon signaling pathway were identified as 5 clusters of biological terms which are related to the central nodes. It can be concluded that the cytokine-mediated signaling pathway is the major pathway that is dysregulated after laser application in the treated skin.
激光疗法在皮肤科手术中是一种有效的方法。二氧化碳激光疗法是皮肤外科手术的金标准治疗方法。本研究旨在评估二氧化碳激光手术后干扰素的变化。从基因表达综合数据库(GEO)下载二氧化碳激光治疗7天后相对于对照组手臂皮肤的显著差异表达基因(DEGs),并通过STRING数据库(Cytoscape软件的一个应用程序)将其纳入蛋白质-蛋白质相互作用网络。使用Clue GO软件通过基因本体论识别并富集中心DEGs。构建了一个包含78个DEGs和100个邻域的网络,并引入了STAT1、MX1、ISG15、OAS1、IFIT1、IRF8、OASL、OAS2和RSAD2作为枢纽,以及STAT1、PTPRC、MX1、IRF8、ISG15、IL6、RORC、SAMSN1和IFIT1作为瓶颈。细胞因子介导的信号通路、干扰素γ信号通路、丙型肝炎、干扰素α/β信号通路和I型干扰素信号通路被确定为与中心节点相关的5个生物学术语簇。可以得出结论,细胞因子介导的信号通路是激光照射后治疗皮肤中失调的主要通路。