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土壤微生物群落与葡萄酒风土:研究差距与数据需求

Soil Microbial Communities and Wine Terroir: Research Gaps and Data Needs.

作者信息

Franco Gabriela Crystal, Leiva Jasmine, Nand Sanjiev, Lee Danica Marvi, Hajkowski Michael, Dick Katherine, Withers Brennan, Soto LuzMaria, Mingoa Benjamin-Rafael, Acholonu Michael, Hutchins Amari, Neely Lucy, Anand Archana

机构信息

Department of Biology, College of Science and Engineering, San Francisco State University, 1600 Holloway Avenue, San Francisco, CA 94132, USA.

Department of Biology, Howard University, 2400 6th St NW, Washington, DC 20059, USA.

出版信息

Foods. 2024 Aug 6;13(16):2475. doi: 10.3390/foods13162475.

Abstract

Microbes found in soil can have a significant impact on the taste and quality of wine, also referred to as wine terroir. To date, wine terroir has been thought to be associated with the physical and chemical characteristics of the soil. However, there is a fragmented understanding of the contribution of vineyard soil microbes to wine terroir. Additionally, vineyards can play an important role in carbon sequestration since the promotion of healthy soil and microbial communities directly impacts greenhouse gas emissions in the atmosphere. We review 24 studies that explore the role of soil microbial communities in vineyards and their influence on grapevine health, grape composition, and wine quality. Studies spanning 2015 to 2018 laid a foundation by exploring soil microbial biogeography in vineyards, vineyard management effects, and the reservoir function of soil microbes for grape-associated microbiota. On the other hand, studies spanning 2019 to 2023 appear to have a more specific and targeted approach, delving into the relationships between soil microbes and grape metabolites, the microbial distribution at different soil depths, and microbial influences on wine flavor and composition. Next, we identify research gaps and make recommendations for future work. Specifically, most of the studies utilize targeted sequencing (16S, 26S, ITS), which only reveals community composition. Utilizing high-throughput omics approaches such as shotgun sequencing (to infer function) and transcriptomics (for actual function) is vital to determining the specific mechanisms by which soil microbes influence grape chemistry. Going forward, understanding the long-term effects of vineyard management practices and climate change on soil microbiology, grapevine trunk diseases, and the role of bacteriophages in vineyard soil and wine-making would be a fruitful investigation. Overall, the studies presented shed light on the importance of soil microbiomes and their interactions with grapevines in shaping wine production. However, there are still many aspects of this complex ecosystem that require further exploration and understanding to support sustainable viticulture and enhance wine quality.

摘要

土壤中的微生物会对葡萄酒的风味和品质产生重大影响,葡萄酒的风味和品质也被称为葡萄酒风土。迄今为止,人们一直认为葡萄酒风土与土壤的物理和化学特性有关。然而,对于葡萄园土壤微生物对葡萄酒风土的贡献,人们的理解还比较零散。此外,葡萄园在碳固存方面可以发挥重要作用,因为促进健康的土壤和微生物群落直接影响大气中的温室气体排放。我们回顾了24项研究,这些研究探讨了葡萄园土壤微生物群落的作用及其对葡萄健康、葡萄成分和葡萄酒品质的影响。2015年至2018年的研究通过探索葡萄园土壤微生物生物地理学、葡萄园管理效果以及土壤微生物对葡萄相关微生物群的储存功能奠定了基础。另一方面,2019年至2023年的研究似乎采用了更具体、更有针对性的方法,深入研究土壤微生物与葡萄代谢物之间的关系、不同土壤深度的微生物分布以及微生物对葡萄酒风味和成分的影响。接下来,我们确定研究空白,并为未来的工作提出建议。具体而言,大多数研究采用靶向测序(16S、26S、ITS),这只能揭示群落组成。利用高通量组学方法,如鸟枪法测序(以推断功能)和转录组学(用于实际功能),对于确定土壤微生物影响葡萄化学的具体机制至关重要。展望未来,了解葡萄园管理实践和气候变化对土壤微生物学、葡萄树干病害的长期影响,以及噬菌体在葡萄园土壤和酿酒中的作用,将是一项富有成果的研究。总体而言,所呈现的研究揭示了土壤微生物群及其与葡萄树在塑造葡萄酒生产过程中的相互作用的重要性。然而,这个复杂生态系统的许多方面仍需要进一步探索和理解,以支持可持续葡萄栽培并提高葡萄酒品质。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b466/11354026/918f01a50fd0/foods-13-02475-g001.jpg

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