College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China.
Laboratory of Aquatic Sciences, Key Laboratory of Animal Nutrition and Feed Science in South China of Ministry of Agriculture and Rural Affairs, Guangdong Key Laboratory of Animal Breeding and Nutrition, Institute of Animal Science, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.
Genes (Basel). 2024 Jul 26;15(8):987. doi: 10.3390/genes15080987.
Hypoxia is a common environmental stressor in aquatic ecosystems, and during the cultivation process, is prone to death because it is hypoxia-intolerant, which brings huge economic losses to farmers. The pituitary gland is a crucial endocrine gland in fish, and it is mainly involved in the secretion, storage, and regulation of hormones. In the present study, we compared the transcriptional responses to serious hypoxia in the pituitary gland among hypoxia-sensitive (HS) and hypoxia-tolerant (HT) and a control group that received a normal oxygen supply (C0). The fish were categorized according to the time required to lose balance during a hypoxia treatment. A total of 129,251,170 raw reads were obtained. After raw sequence filtering, 43,461,745, 42,609,567, and 42,730,282 clean reads were obtained for the HS, HT, and C0 groups, respectively. A transcriptomic comparison revealed 1234 genes that were differentially expressed in C0 vs. HS, while 1646 differentially expressed genes were obtained for C0 vs. HT. In addition, the results for HS vs. HT showed that 367 upregulated and 41 downregulated differentially expressed genes were obtained for a total of 408 differentially expressed genes. A KEGG analysis of C0 vs. HS, C0 vs. HT, and HS vs. HT identified 315, 322, and 219 enriched pathways, respectively. Similar hypoxia-induced transcription patterns suggested that the downregulated DEGs and enriched pathways were related to pathways of neurodegeneration in multiple diseases, pathways in cancer, thermogenesis, microRNAs in cancer, diabetic cardiomyopathy, and renin secretion. However, in the upregulated DEGs, the PI3K-Akt signaling pathway (C0 vs. HS), microRNAs in cancer (C0 vs. HT), and HIF-1 signaling pathway (HS vs. HT) were significantly enriched. There is a lack of clarity regarding the role of the pituitary gland in hypoxic stress. These results not only provide new insights into the mechanism by which pituitary tissue copes with hypoxia stress in but also offer a basis for breeding with hypoxia-resistant traits.
缺氧是水生生态系统中常见的环境胁迫因素,在养殖过程中,由于不耐缺氧,容易死亡,给养殖户带来巨大的经济损失。脑垂体是鱼类重要的内分泌腺,主要参与激素的分泌、储存和调节。本研究比较了缺氧敏感(HS)和缺氧耐受(HT)与正常供氧(C0)对照组鱼类脑垂体在严重缺氧时的转录反应。根据缺氧处理过程中失去平衡所需的时间,将鱼分为三组。共获得 129251170 条原始读数。经过原始序列过滤后,HS、HT 和 C0 组分别获得 43461745、42609567 和 42730282 条清洁读数。转录组比较显示,C0 与 HS 相比有 1234 个基因差异表达,C0 与 HT 相比有 1646 个基因差异表达。此外,HS 与 HT 相比,共获得 367 个上调和 41 个下调的差异表达基因,共 408 个差异表达基因。KEGG 分析 C0 与 HS、C0 与 HT、HS 与 HT 分别鉴定出 315、322 和 219 个富集途径。相似的缺氧诱导转录模式表明,下调的 DEGs 和富集途径与多种疾病的神经退行性变途径、癌症途径、生热、癌症中的 microRNAs、糖尿病心肌病和肾素分泌有关。然而,在上调的 DEGs 中,PI3K-Akt 信号通路(C0 与 HS)、癌症中的 microRNAs(C0 与 HT)和 HIF-1 信号通路(HS 与 HT)显著富集。脑垂体在缺氧应激中的作用尚不清楚。这些结果不仅为了解鱼类脑垂体组织应对缺氧应激的机制提供了新的见解,也为培育具有耐缺氧特性的鱼类提供了依据。