Baek Kiwoon, Jang Sumin, Goh Jaeduk, Choi Ahyoung
Biological Resources Research Department, Nakdonggang National Institute of Biological Resources (NNIBR), Sangju 37242, Republic of Korea.
Microorganisms. 2024 Aug 14;12(8):1671. doi: 10.3390/microorganisms12081671.
A Gram-stain-negative, obligately aerobic, non-motile, rod-shaped bacterial strain designated SJW1-29 was isolated from brackish water samples collected from the Seomjin River, Republic of Korea. The purpose of this study was to characterize strain SJW1-29 and determine its taxonomic position as a potential new genus within the family . The strain grew within the range of 10-30 °C (optimum, 25 °C), pH 5.0-10.0 (optimum, 7.0), and 1-4% NaCl (optimum, 3%). Phylogenetic analysis based on the 16S rRNA gene revealed that strain SJW1-29 belongs to the family and is closely related to Shu-9-SY12-35C (91.3% similarity), R491 (90.6%), and DMA-K-7a (90.0%), while the similarities to strains within the order were lower than 90.0%. The genome is 7.1 Mbp with a G+C content of 50.7 mol%. The use of genome-relatedness indices confirmed that this strain belongs to a new genus. The major polar lipid profile consisted of phosphatidylethanolamine, and MK-7 was the predominant menaquinone. The predominant fatty acids were summed feature 3 (C7 and/or C6), iso-C, iso-C 3-OH, and C, representing more than 80% of the total fatty acids. The phenotypic, chemotaxonomic, genetic, and phylogenetic properties suggest that strain SJW1-29 represents a novel species within a new genus in the family , for which the name gen. nov., sp. nov., is proposed. The type strain of is SJW1-29 (=KCTC 72493 = NBRC 114061 = FBCC-B16924).
从韩国蟾津江采集的微咸水样本中分离出一株革兰氏染色阴性、专性需氧、无运动性、杆状的细菌菌株,命名为SJW1-29。本研究的目的是对菌株SJW1-29进行特征描述,并确定其作为该科内一个潜在新属的分类地位。该菌株在10-30°C(最适温度25°C)、pH 5.0-10.0(最适pH 7.0)和1-4% NaCl(最适盐度3%)的范围内生长。基于16S rRNA基因的系统发育分析表明,菌株SJW1-29属于该科,与舒氏菌属Shu-9-SY12-35C(相似度91.3%)、R491(90.6%)和DMA-K-7a(90.0%)密切相关,而与该目内其他菌株的相似度低于90.0%。该基因组大小为7.1 Mbp,G+C含量为50.7 mol%。基因组相关性指数的分析证实该菌株属于一个新属。主要极性脂类成分包括磷脂酰乙醇胺,MK-7是主要的甲基萘醌。主要脂肪酸为总和特征3(C7和/或C6)、异-C、异-C 3-OH和C,占总脂肪酸的80%以上。表型、化学分类、遗传和系统发育特性表明,菌株SJW1-29代表了该科一个新属内的一个新物种,为此提议将其命名为[新属名]属([新属名] gen. nov.)、[新种名]种([新种名] sp. nov.)。[新属名]的模式菌株为SJW1-29(=KCTC 72493 = NBRC 114061 = FBCC-B16924)。