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玫瑰色横纹杆菌,新属,新种,从土壤中分离得到。

Rhabdobacter roseus gen. nov., sp. nov., isolated from soil.

作者信息

Dahal Ram Hari, Kim Jaisoo

机构信息

Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Kyonggi-Do 443-760, South Korea.

出版信息

Int J Syst Evol Microbiol. 2016 Jan;66(1):308-314. doi: 10.1099/ijsem.0.000714. Epub 2015 Oct 26.

Abstract

An aerobic, Gram-stain-negative, oxidase- and catalase-positive, non-motile, non-spore-forming, rod-shaped, pink-pigmented bacterium, designated strain R49T, was isolated from soil. Flexirubin-type pigments were absent. Phylogenetic analysis based on its 16S rRNA gene sequence revealed that strain R49T formed a lineage within the family Cytophagaceae of the phylum Bacteroidetes that was distinct from the most closely related genera Dyadobacter (91.98-93.85 % sequence similarity), Persicitalea (88.69 %) and Runella (84.79-85.81 %). The major isoprenoid quinone was menaquinone-7 (MK-7) and the major polar lipid was phosphatidylethanolamine. The major cellular fatty acids were summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), iso-C15 : 0, C16 : 1ω5c, C16 : 0 and iso-C17 : 0 3-OH. The DNA G+C content of strain R49T was 53.9 mol%. On the basis of phenotypic, genotypic and phylogenetic analysis, strain R49T represents a novel species of a new genus in the family Cytophagaceae, for which the name Rhabdobacter roseus gen. nov., sp. nov. is proposed. The type strain of Rhabdobacter roseus is R49T ( = KEMB 9005-318T = KACC 18395T = JCM 30685T).

摘要

从土壤中分离出一株需氧、革兰氏染色阴性、氧化酶和过氧化氢酶阳性、无运动性、不形成芽孢、杆状、粉红色色素的细菌,命名为菌株R49T。该菌株不存在柔韧红素类色素。基于其16S rRNA基因序列的系统发育分析表明,菌株R49T在拟杆菌门噬细胞菌科内形成了一个分支,与最相近的属双杆菌属(序列相似性为91.98 - 93.85%)、栖泥杆菌属(88.69%)和Runella属(84.79 - 85.81%)不同。主要类异戊二烯醌为甲基萘醌-7(MK - 7),主要极性脂为磷脂酰乙醇胺。主要细胞脂肪酸为总和特征3(C16 : 1ω7c和/或C16 : 1ω6c)、异C15 : 0、C16 : 1ω5c、C16 : 0和异C17 : 0 3 - OH。菌株R49T的DNA G + C含量为53.9 mol%。基于表型、基因型和系统发育分析,菌株R49T代表噬细胞菌科一个新属的一个新物种,为此提出新属名玫瑰杆状菌属(Rhabdobacter),新种名玫瑰玫瑰杆状菌(Rhabdobacter roseus)。玫瑰玫瑰杆状菌的模式菌株为R49T(= KEMB 9005 - 318T = KACC 18395T = JCM 30685T)。

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