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作为多维生物标志物的TCF3:泛癌分析中的致癌性、基因组改变及免疫格局

TCF3 as a multidimensional biomarker: oncogenicity, genomic alterations, and immune landscape in pan-cancer analysis.

作者信息

Nie Huiling, Yu Yang, Zhou Siqi, Xu Yue, Chen Xi, Qin Xun, Liu Zhangyu, Huang Jiayu, Zhang Hailiang, Yao Jin, Jiang Qin, Wei Bingbing, Qin Xiaojian

机构信息

The Affiliated Eye Hospital and the Fourth School of Clinical Medicine, Nanjing Medical University, Nanjing 210004, China.

Department of Urology, Fudan University Shanghai Cancer Center; Department of Oncology, Shanghai Medical College, Fudan University, Shanghai 200032, China.

出版信息

Acta Biochim Biophys Sin (Shanghai). 2024 Aug 27;57(2):195-208. doi: 10.3724/abbs.2024126.

Abstract

Transcription factor 3 (TCF3), a pivotal member of the TCF/LEF family, plays a critical role in tumorigenesis. Nonetheless, its impact on the tumor microenvironment (TME) and cancer phenotypes remains elusive. We perform an exhaustive analysis of TCF3 expression, DNA variation profiles, prognostic implications, and associations with the TME and immunological aspects. This study is based on a large-scale pan-cancer cohort, encompassing over 17,000 cancer patients from multiple independent datasets, validated by assays. Our results show that TCF3/4/7 exhibits differential expression patterns between normal and tumor tissues across pan-cancer analyses. Mutational analysis of TCF3 across diverse cancer types reveals the highest alteration rates in biliary tract cancer. Additionally, mutations and single nucleotide variants in TCF3/4/7 are found to exert varied effects on patient prognosis. Importantly, TCF3 emerges as a robust predictor of survival across all cancer cohorts and among patients receiving immune checkpoint inhibitors. Elevated TCF3 expression is correlated with more aggressive cancer subtypes, as validated by immunohistochemistry and diverse cohort data. Furthermore, TCF3 expression is positively correlated with intratumoral heterogeneity and angiogenesis. investigations demonstrate that TCF3 is involved in epithelial-mesenchymal transition, migration, invasion, and angiogenesis. These effects are likely mediated through the interaction of TCF3 with the NF-κB/MMP2 pathway, which is modulated by IL-17A in human uveal melanoma MUM2B cells. This study elucidates, for the first time, the significant associations of TCF3 with DNA variation profiles, prognostic outcomes, and the TME in multiple cancer contexts. TCF3 holds promise as a molecular marker for diagnosis and as a potential target for novel therapeutic strategies, particularly in uveal melanoma.

摘要

转录因子3(TCF3)是TCF/LEF家族的关键成员,在肿瘤发生过程中起着至关重要的作用。然而,其对肿瘤微环境(TME)和癌症表型的影响仍不清楚。我们对TCF3的表达、DNA变异谱、预后意义以及与TME和免疫学方面的关联进行了详尽分析。本研究基于一个大规模的泛癌队列,涵盖了来自多个独立数据集的17000多名癌症患者,并通过检测进行了验证。我们的结果表明,在泛癌分析中,TCF3/4/7在正常组织和肿瘤组织之间表现出不同的表达模式。对不同癌症类型的TCF3进行突变分析发现,胆管癌中的改变率最高。此外,发现TCF3/4/7中的突变和单核苷酸变异对患者预后有不同影响。重要的是,TCF3在所有癌症队列以及接受免疫检查点抑制剂治疗的患者中均是生存的有力预测指标。免疫组织化学和不同队列数据验证,TCF3表达升高与更具侵袭性的癌症亚型相关。此外,TCF3表达与肿瘤内异质性和血管生成呈正相关。研究表明,TCF3参与上皮-间质转化、迁移、侵袭和血管生成。这些作用可能是通过TCF3与NF-κB/MMP2途径的相互作用介导的,在人葡萄膜黑色素瘤MUM2B细胞中,该途径受IL-17A调节。本研究首次阐明了TCF3在多种癌症背景下与DNA变异谱、预后结果和TME的重要关联。TCF3有望作为诊断的分子标志物以及新型治疗策略的潜在靶点,尤其是在葡萄膜黑色素瘤中。

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