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工程化一种同时提高活性和热稳定性的羟甾脱氢酶,以高效生物合成熊去氧胆酸。

Engineering of a hydroxysteroid dehydrogenase with simultaneous enhancement in activity and thermostability for efficient biosynthesis of ursodeoxycholic acid.

机构信息

Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou, China.

The National and Local Joint Engineering Research Center for Biomanufacturing of Chiral Chemicals, Zhejiang University of Technology, Hangzhou, China.

出版信息

Appl Environ Microbiol. 2024 Sep 18;90(9):e0123724. doi: 10.1128/aem.01237-24. Epub 2024 Aug 29.

Abstract

UNLABELLED

Hydroxysteroid dehydrogenases (HSDHs) catalyze the oxidation/reduction of hydroxyl/keto groups of steroids with high regio- or stereoselectivity, playing an essential role in producing optically pure chemicals. In this work, a novel approach was developed to simultaneously improve the stability and activity of 7β-hydroxysteroid dehydrogenase (7β-HSDH) by combining B-factor analysis and computer-aided prediction. Several advantageous mutants were identified, and the most promising variant, S51Y/P202Y, exhibited 2.3-fold improvements in catalytic activity, 3.3-fold in half-life at 40°C, and 4.7-fold in catalytic efficiency (), respectively. Structural modeling analysis showed that the shortened reversible oxidation reaction catalytic distance and the strengthened residue interactions compared to the wild type were attributed to the improved stability and activity of the obtained mutants. To synthesize ursodeoxycholic acid cost-effectively by mutant S51Y/P202Y, a NAD-kinase was employed to facilitate the substitution of nicotinamide adenine dinucleotide phosphate (NADP) with nicotinamide adenine dinucleotide (NAD) in the whole-cell catalysis system. The substrate 7-ketolithocholic acid (100 mM) was converted completely in 0.5 h, achieving a space-time yield of 1,887.3 g L d. This work provided a general target-oriented strategy for obtaining stable and highly active dehydrogenase for efficient biosynthesis.

IMPORTANCE

Hydroxysteroid dehydrogenases have emerged as indispensable tools in the synthesis of steroids, bile acids, and other steroid derivatives for the pharmaceutical and chemical industries. In this study, a novel approach was developed to simultaneously improve the stability and activity of a hydroxysteroid dehydrogenase by combining B-factor analysis and computer-aided prediction. This semi-rational method was demonstrated to be highly effective for enzyme engineering. In addition, NAD kinase was introduced to convert NAD to NADP for effective coenzyme regeneration in the whole-cell multienzyme-catalyzed system. This strategy reduces the significant economic costs associated with externally supplemented cofactors in NADP-dependent biosynthetic pathways.

摘要

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羟甾体脱氢酶(HSDHs)具有高度区域或立体选择性地催化甾体的羟基/酮基氧化/还原,在生产光学纯化学品方面发挥着重要作用。在这项工作中,通过结合 B 因子分析和计算机辅助预测,开发了一种同时提高 7β-羟甾体脱氢酶(7β-HSDH)稳定性和活性的新方法。鉴定了几个有利的突变体,最有前途的变体 S51Y/P202Y 的催化活性提高了 2.3 倍,在 40°C 时半衰期提高了 3.3 倍,催化效率提高了 4.7 倍()。结构建模分析表明,与野生型相比,缩短的可逆氧化反应催化距离和增强的残基相互作用是导致获得的突变体稳定性和活性提高的原因。为了通过突变体 S51Y/P202Y 经济有效地合成熊去氧胆酸,采用 NAD-激酶促进全细胞催化系统中烟酰胺腺嘌呤二核苷酸磷酸(NADP)与烟酰胺腺嘌呤二核苷酸(NAD)的取代。100mM 的底物 7-酮石胆酸在 0.5 小时内完全转化,时空产率达到 1,887.3g L d。这项工作为获得用于高效生物合成的稳定和高活性脱氢酶提供了一种通用的靶向策略。

重要性

羟甾体脱氢酶已成为制药和化学工业中甾体、胆汁酸和其他甾体衍生物合成不可或缺的工具。在这项研究中,通过结合 B 因子分析和计算机辅助预测,开发了一种同时提高羟甾体脱氢酶稳定性和活性的新方法。该半理性方法被证明对酶工程非常有效。此外,引入 NAD 激酶将 NAD 转化为 NADP,以在全细胞多酶催化系统中有效再生辅酶。该策略降低了 NADP 依赖性生物合成途径中外加辅助因子带来的显著经济成本。

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