Department of Integrative Biotechnology, Sungkyunkwan University, Natural Science Campus, 2066 Seobu-ro, Jangan-gu, Suwon-si, Gyeonggi-do 16419, Republic of Korea.
Department of Marine Biology, College of Ocean Science and Technology, Kunsan National University, 558 Daehak-ro, Gunsan-si, Jeollabuk-do 54150, Republic of Korea.
Int J Syst Evol Microbiol. 2024 Aug;74(8). doi: 10.1099/ijsem.0.006474.
Two novel bacteria, MJ-SS3 and MJ-SS4, were isolated from tidal flat sediment sampled in Gochang, Republic of Korea. The isolates were Gram-stain-negative, aerobic, non-motile, rod-shaped, yellow-coloured, oxidase-positive, and catalase-positive. Strains MJ-SS3 and MJ-SS4 grew at 20-37 °C (optimum, 30 °C), at pH 6-8 (optimum, pH 7.0) and in the presence of 0-7 % (w/v) NaCl (optimum, 2.0 % NaCl). Strains MJ-SS3 and MJ-SS4 showed 99.9 % 16S rRNA gene sequence similarity. Phylogenetic analysis based on genome and 16S rRNA gene sequences indicated that strains MJ-SS3 and MJ-SS4 were affiliated with the family and most closely related to 1494 (95.3 %), NBU2984 (95.2 %), JLT21 (95.2 %), NH57N (95.1 %), and YCS-16 (95.1 %). The major respiratory quinone was menaquinone-6. The major identified polar lipids were phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, and amino lipids. The major cellular fatty acids of strain MJ-SS3 were iso-C G (24.6 %), iso-C (21.6 %), and iso-C 3-OH (15.8 %). The genome length of strain MJ-SS3 is 3.1 Mbp (DNA G+C content, 32.5 mol%) and it has 2822 coding and 59 tRNA genes. The average amino acid identity and average nucleotide identity values, as well as biochemical, phylogenetic, and physiological characteristics, strongly supported the genotypic and phenotypic differentiation of strains MJ-SS3 and MJ-SS4 from other members of the family . Hence, strains MJ-SS3 and MJ-SS4 are considered to represent a novel species of a new genus in the family , for which the gen. nov., sp. nov. is proposed. The type strain is MJ-SS3 (=KCTC 102114=KEMB 20189=JCM 36595), with reference strain MJ-SS4 (=KCTC 102115=KEMB 20190).
从韩国高昌潮汐滩沉积物中分离到两株新的细菌,MJ-SS3 和 MJ-SS4。这些分离物为革兰氏阴性、需氧、非运动、杆状、黄色、氧化酶阳性和过氧化氢酶阳性。菌株 MJ-SS3 和 MJ-SS4 在 20-37°C(最佳温度 30°C)、pH6-8(最佳 pH7.0)和 0-7%(w/v)NaCl(最佳 2.0%NaCl)的条件下生长。菌株 MJ-SS3 和 MJ-SS4 的 16S rRNA 基因序列相似度为 99.9%。基于基因组和 16S rRNA 基因序列的系统发育分析表明,菌株 MJ-SS3 和 MJ-SS4 属于 科,与 1494(95.3%)、NBU2984(95.2%)、JLT21(95.2%)、NH57N(95.1%)和 YCS-16(95.1%)最为密切相关。主要的呼吸醌是menaquinone-6。主要鉴定的极性脂是磷脂酰乙醇胺、磷脂酰甘油、磷脂酰胆碱和氨基脂。菌株 MJ-SS3 的主要细胞脂肪酸是 iso-C G(24.6%)、iso-C(21.6%)和 iso-C 3-OH(15.8%)。菌株 MJ-SS3 的基因组长度为 3.1 Mbp(DNA G+C 含量为 32.5mol%),包含 2822 个编码基因和 59 个 tRNA 基因。菌株 MJ-SS3 和 MJ-SS4 与该科其他成员的平均氨基酸同一性和平均核苷酸同一性值以及生化、系统发育和生理特征均强烈支持它们在基因型和表型上的分化。因此,菌株 MJ-SS3 和 MJ-SS4 被认为代表了该科一个新属的一个新种,建议采用新属名 ,新种名 。模式菌株为 MJ-SS3(=KCTC 102114=KEMB 20189=JCM 36595),参考菌株为 MJ-SS4(=KCTC 102115=KEMB 20190)。