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俘精酸酐立体动力学指南。

A guide to bullvalene stereodynamics.

作者信息

Ives Robert A, Maturi William, Gill Matthew T, Rankine Conor, McGonigal Paul R

机构信息

Department of Chemistry, University of York Heslington York YO10 5DD UK

Department of Chemistry, Durham University Lower Mountjoy, Stockton Road Durham DH1 3LE UK.

出版信息

Chem Sci. 2024 Aug 23;15(36):14608-17. doi: 10.1039/d4sc03700f.

Abstract

Here, we analyze the stereodynamic properties of bullvalenes using principal moments of inertia and exit vector plots to draw comparisons with commonly used ring systems in medicinal chemistry. To aid analyses, we first classify (i) the four elementary rearrangement steps available to substituted bullvalenes, which (ii) can be described by applying positional descriptors (α, β, γ, and δ) to the substituents. We also (iii) derive an intuitive equation to calculate the number of isomers for a given bullvalene system. Using DFT-modelled structures for di-, tri-, and tetrasubstituted bullvalenes, generated using a newly developed computational tool (), we show that their 3D shapes and the exit vectors available from the bullvalene scaffold make them comparable to other bioisosteres currently used to replace planar aromatic ring systems in drug discovery. Unlike conventional ring systems, the shapeshifting valence isomerism of bullvalenes gives rise to numerous shapes and substituent relationships attainable as a concentration-independent dynamic covalent library from a single compound. We visualize this property by applying population weightings to the principal moments of inertia and exit vector analyses to reflect the relative thermodynamic stabilities of the available isomers.

摘要

在此,我们利用惯性主轴和出射矢量图分析了bullvalenes的立体动力学性质,以便与药物化学中常用的环系进行比较。为了辅助分析,我们首先对(i)取代bullvalenes可用的四个基本重排步骤进行分类,(ii)这可以通过对取代基应用位置描述符(α、β、γ和δ)来描述。我们还(iii)推导了一个直观的方程来计算给定bullvalene体系的异构体数量。使用通过新开发的计算工具生成的二取代、三取代和四取代bullvalenes的密度泛函理论(DFT)建模结构,我们表明它们的三维形状以及bullvalene支架的出射矢量使它们可与目前在药物发现中用于取代平面芳香环系的其他生物电子等排体相媲美。与传统环系不同,bullvalenes的变价异构现象产生了许多形状和取代基关系,这些关系可以从单一化合物作为浓度无关的动态共价库获得。我们通过对惯性主轴和出射矢量分析应用总体权重来反映可用异构体的相对热力学稳定性,从而直观地展示这一性质。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9813/11410073/8dbeb46fb88b/d4sc03700f-f1.jpg

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