Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, Qinghai, 810016, China.
Laboratory for Research and Utilization of Qinghai Tibet Plateau Germplasm Resources, Xining, Qinghai, 810016, China.
BMC Genomics. 2024 Sep 2;25(1):823. doi: 10.1186/s12864-024-10738-9.
The Flavonoid 3'-hydroxylase gene(F3'H) is an important structural gene in the anthocyanin synthesis pathway of plants, which has been proven to be involved in the color formation of organs such as leaves, flowers, and fruits in many plants. However, the mechanism and function in barley are still unclear.
In order to explore the molecular mechanism of the grain color formation of purple qingke, we used the cultivated qingke variety Nierumzha (purple grain) and the selected qingke variety Kunlun 10 (white grain) to conduct transcriptomic sequencing at the early milk, late milk and soft dough stage. Weighted Gene Co-expression Network Analysis (WGCNA) was used to construct weighted gene co-expression network related to grain color formation, and three key modules (brown, yellow, and turquoise modules) related to purple grain of qingke were selected. F3'H (HORVU1Hr1G094880) was selected from the hub gene of the module for the yeast library, yeast two-hybrid (Y2H), subcellular localization and other studies. It was found that in purple qingke, HvnF3'H mainly distributed in the cytoplasm and cell membrane and interacted with several stress proteins such as methyltransferase protein and zinc finger protein.
The results of this study provide reference for the regulation mechanism of anthocyanin-related genes in purple grain qingke.
类黄酮 3'-羟化酶基因(F3'H)是植物中花色苷合成途径的一个重要结构基因,已被证明参与许多植物的叶片、花朵和果实等器官的颜色形成。然而,其在大麦中的机制和功能仍不清楚。
为了探索紫青稞粒色形成的分子机制,我们利用栽培青稞品种尼尔姆扎(紫粒)和选育的青稞品种昆仑 10 号(白粒),在乳熟早期、乳熟后期和面团软化期进行转录组测序。利用加权基因共表达网络分析(WGCNA)构建与粒色形成相关的加权基因共表达网络,并选择三个与青稞紫粒相关的关键模块(棕色、黄色和绿松石模块)。从模块的枢纽基因中选择 F3'H(HORVU1Hr1G094880)进行酵母文库、酵母双杂交(Y2H)、亚细胞定位等研究。结果表明,在紫青稞中,HvnF3'H 主要分布在细胞质和细胞膜中,并与甲基转移酶蛋白和锌指蛋白等几种应激蛋白相互作用。
本研究结果为紫粒青稞中花色苷相关基因的调控机制提供了参考。