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一种用于将芳香翻译后修饰类似物进行位点特异性化学安装到蛋白质中的通用方法。

A Versatile Method for Site-Specific Chemical Installation of Aromatic Posttranslational Modification Analogs into Proteins.

机构信息

School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 69978, Israel.

Laboratory of Molecular and Chemical Biology of Neurodegeneration, Institute of Bioengineering, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne CH-1015, Switzerland.

出版信息

J Am Chem Soc. 2024 Sep 18;146(37):25788-25798. doi: 10.1021/jacs.4c08416. Epub 2024 Sep 3.

DOI:10.1021/jacs.4c08416
PMID:39224092
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11421021/
Abstract

Posttranslational modifications (PTMs) of proteins play central roles in regulating the protein structure, interactome, and functions. A notable modification site is the aromatic side chain of Tyr, which undergoes modifications such as phosphorylation and nitration. Despite the biological and physiological importance of Tyr-PTMs, our current understanding of the mechanisms by which these modifications contribute to human health and disease remains incomplete. This knowledge gap arises from the absence of natural amino acids that can mimic these PTMs and the lack of synthetic tools for the site-specific introduction of aromatic PTMs into proteins. Herein, we describe a facile method for the site-specific chemical installation of aromatic PTMs into proteins through palladium-mediated S-C(sp) bond formation under ambient conditions. We demonstrate the incorporation of novel PTMs such as Tyr-nitration and phosphorylation analogs to synthetic and recombinantly expressed Cys-containing peptides and proteins within minutes and in good yields. To demonstrate the versatility of our approach, we employed it to prepare 10 site-specifically modified proteins, including nitrated and phosphorylated analogs of Myc and Max proteins. Furthermore, we prepared a focused library of site-specifically nitrated and phosphorylated α-synuclein (α-Syn) protein, which enabled, for the first time, deciphering the role of these competing modifications in regulating α-Syn conformation aggregation in vitro. Our strategy offers advantages over synthetic or semisynthetic approaches, as it enables rapid and selective transfer of rarely explored aromatic PTMs into recombinant proteins, thus facilitating the generation of novel libraries of homogeneous posttranslationally modified proteins for biomarker discovery, mechanistic studies, and drug discovery.

摘要

蛋白质的翻译后修饰(PTMs)在调节蛋白质结构、互作组和功能方面起着核心作用。一个显著的修饰位点是 Tyr 的芳香侧链,它会发生磷酸化和硝化等修饰。尽管 Tyr-PTMs 具有重要的生物学和生理学意义,但我们对这些修饰如何促进人类健康和疾病的机制的理解仍然不完整。这种知识差距源于缺乏可以模拟这些 PTMs 的天然氨基酸以及缺乏用于将芳香 PTM 定点引入蛋白质的合成工具。在此,我们描述了一种简便的方法,可通过钯介导的 S-C(sp)键形成在环境条件下将芳香 PTM 定点引入蛋白质中。我们证明了几分钟内可在合成和重组表达的含有 Cys 的肽和蛋白质中掺入新型 PTM,如 Tyr-硝化和磷酸化类似物,且产率良好。为了证明我们方法的多功能性,我们用它来制备了 10 种定点修饰的蛋白质,包括 Myc 和 Max 蛋白的硝化和磷酸化类似物。此外,我们还制备了一组定点硝化和磷酸化的α-突触核蛋白(α-Syn)的聚焦文库,这首次使我们能够在体外解析这些竞争修饰在调节α-Syn 构象聚集中的作用。与合成或半合成方法相比,我们的策略具有优势,因为它可以快速而有选择性地将很少探索的芳香 PTM 转移到重组蛋白中,从而促进用于生物标志物发现、机制研究和药物发现的同质翻译后修饰蛋白质的新型文库的生成。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/118587309940/ja4c08416_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/76daa71519cf/ja4c08416_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/9bdb7fb6317f/ja4c08416_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/433abd442dc9/ja4c08416_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/2933d461e3e3/ja4c08416_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/e2ab44069873/ja4c08416_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/7e38b061f181/ja4c08416_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/118587309940/ja4c08416_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/76daa71519cf/ja4c08416_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/9bdb7fb6317f/ja4c08416_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/433abd442dc9/ja4c08416_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/2933d461e3e3/ja4c08416_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/e2ab44069873/ja4c08416_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/7e38b061f181/ja4c08416_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/de3e/11421021/118587309940/ja4c08416_0007.jpg

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